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Report for CCDS40156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40156.1 Public Mus musculus 7 4933402N03Rik 23 108 98 CCDS HistoryNCBI Gene:233918Re-query CCDS DB by CCDS ID:40156.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40156.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070980.3 ENSMUSP00000070291.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070980.3Link to Ensembl Protein Viewer:ENSMUSP00000070291.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000070980Re-query CCDS DB by Protein ID:ENSMUSP00000070291
Original member Current member NCBI NM_173409.4 NP_775585.1 Accepted alive Link to Nucleotide Sequence:NM_173409.4Link to Protein Sequence:NP_775585.1Re-query CCDS DB by Nucleotide ID:NM_173409Re-query CCDS DB by Protein ID:NP_775585Link to BLAST:NP_775585.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775585.1 329 Q8CDT9 329 100% 0 0

Chromosomal Locations for CCDS 40156.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 131138496 131139212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131145847 131145922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 131146065 131146261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGATTAAGGAGTGGGAAAACCACTTTCAGCAGTATAAAAGCCAGAGATGTGGATATCCAAAGGCTCAGG
AAGGGACCCCAGCCGAGGGAGAGCAAAATAGTAGAAAGCCATCCAGGATCTGCAGTGACAACCATCCCTG
GGTAGTTCAAGATTTCCCACACCACAAAGAGGACCTCTGTACTCCATCACCTTTGGGGATATGGACGGCA
TTCTACAAATCAGATCCACGCATTGCCCTTGGAAAATACTCCCCAATGGAACAAGAAATTCAACATCTCG
GTGGCGTTCATACCAGAGCAGCAAGAAGATTTTTGGTTGAGAAACAATACAAGGAGTGGAGGATGCTGAG
GGAACTCCAGAAGCAGTCTGCAGACTACAAAAGGGCCATAGAGTTGGGAAGAGACCCCTCCTCTTACGCT
GTGTGTGGACCCCCAGAAAAAATATGGACAGCGAAGGTGTCTGTGCCTGCTGAAGAGTTCCAAACGCCGC
ACCGAGAGGTGACAGGCATCAAGAAACACATCAAAAGAATGCAGCTGGCACGAGCCCTGGAAAACAAGCA
GTCTTCTACAGATATTGGAAGGCTGTCCCCCAAAACAGACAAGTTCAGTGAAGAGGGAGAGGATGATGAC
ACGGATAGCAATGATAAAGCCAATCGGGGGGAGAAAGGGGAGGCCAAGTTTGAACCCACAAATAAACGAG
AAGTCATACTGAATGTGGCTTTCAAGTCTGAAGAAACCAAAAGTTGTGTAGTATGCCATCGGAATGATCG
GAAAACCTTCCTCCCAGTGAAGAGACCGGAGAGGCGGATCACGGGCCTCACAAACAGAAACCTCTTCCCT
ATCACTGGCTTTCCTGGAGACCTGATGCTCATGAACCAGGATTTTGTATCAAAGGGAATCCACCCGAGTG
ACGCCATTAAAATCTACTGGCTGCCGGAAGAGGATCTCTTCAAGGGTCGCAAGCAAAGGCCTGCTTGCTG
CCCACATTGA

Translation (329 aa):
MIKEWENHFQQYKSQRCGYPKAQEGTPAEGEQNSRKPSRICSDNHPWVVQDFPHHKEDLCTPSPLGIWTA
FYKSDPRIALGKYSPMEQEIQHLGGVHTRAARRFLVEKQYKEWRMLRELQKQSADYKRAIELGRDPSSYA
VCGPPEKIWTAKVSVPAEEFQTPHREVTGIKKHIKRMQLARALENKQSSTDIGRLSPKTDKFSEEGEDDD
TDSNDKANRGEKGEAKFEPTNKREVILNVAFKSEETKSCVVCHRNDRKTFLPVKRPERRITGLTNRNLFP
ITGFPGDLMLMNQDFVSKGIHPSDAIKIYWLPEEDLFKGRKQRPACCPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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