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Report for CCDS32728.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32728.1 Public Homo sapiens 17 KCTD2 24 110 108 CCDS HistoryNCBI Gene:23510Re-query CCDS DB by CCDS ID:32728.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32728.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322444.7 ENSP00000312814.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322444.7Link to Ensembl Protein Viewer:ENSP00000312814.6Re-query CCDS DB by Nucleotide ID:ENST00000322444Re-query CCDS DB by Protein ID:ENSP00000312814
Original member Current member NCBI NM_015353.3 NP_056168.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015353.3Link to Protein Sequence:NP_056168.1Re-query CCDS DB by Nucleotide ID:NM_015353Re-query CCDS DB by Protein ID:NP_056168Link to BLAST:NP_056168.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056168.1 263 Q14681 263 100% 0 0

Chromosomal Locations for CCDS 32728.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 75047251 75047589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75049220 75049328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75053014 75053105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75059510 75059605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75062120 75062245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75063018 75063047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGGCGGAACTGCAGCTGGACCCGGCGATGGCGGGGCTGGGAGGGGGCGGCGGGAGTGGGGTGGGCGACG
GGGGTGGCCCAGTCCGCGGGCCCCCCAGCCCACGCCCGGCTGGCCCCACGCCCCGCGGGCACGGCCGCCC
GGCTGCCGCCGTCGCGCAGCCGCTGGAGCCGGGTCCCGGACCACCCGAGCGGGCAGGGGGCGGCGGCGCG
GCCCGCTGGGTCAGGCTGAACGTGGGAGGCACCTACTTCGTGACCACCAGACAGACCTTAGGCCGGGAGC
CCAAGTCATTTCTCTGCCGCCTCTGCTGCCAGGAGGACCCGGAGCTGGACTCAGACAAGGATGAGACAGG
AGCCTATCTGATTGACAGGGACCCCACCTACTTTGGTCCTATCCTCAACTACCTCCGCCACGGGAAACTC
ATCATCACTAAGGAGTTGGCAGAAGAAGGTGTGCTGGAGGAAGCGGAGTTTTACAACATCGCGTCCCTTG
TGCGGCTGGTTAAGGAAAGGATACGGGACAATGAGAACAGAACTTCACAAGGCCCCGTGAAGCACGTGTA
CAGAGTCCTGCAGTGTCAGGAAGAAGAGCTCACGCAGATGGTGTCCACGATGTCCGACGGCTGGAAATTC
GAACAGCTCATCAGCATCGGATCTTCCTATAACTACGGCAATGAGGATCAGGCAGAATTCCTCTGTGTTG
TCTCCAGAGAACTAAATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAAGGCGAAGATTCTTCA
GGAGAGAGGATCGCGGATGTAA

Translation (263 aa):
MAELQLDPAMAGLGGGGGSGVGDGGGPVRGPPSPRPAGPTPRGHGRPAAAVAQPLEPGPGPPERAGGGGA
ARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGAYLIDRDPTYFGPILNYLRHGKL
IITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSDGWKF
EQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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