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Report for CCDS23226.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23226.1 Public Mus musculus 9 Cplx3 23 108 98 CCDS HistoryNCBI Gene:235415Re-query CCDS DB by CCDS ID:23226.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23226.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045068.9 ENSMUSP00000046748.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045068.9Link to Ensembl Protein Viewer:ENSMUSP00000046748.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000045068Re-query CCDS DB by Protein ID:ENSMUSP00000046748
Original member Current member NCBI NM_146223.3 NP_666335.1 Accepted alive Link to Nucleotide Sequence:NM_146223.3Link to Protein Sequence:NP_666335.1Re-query CCDS DB by Nucleotide ID:NM_146223Re-query CCDS DB by Protein ID:NP_666335Link to BLAST:NP_666335.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666335.1 158 Q8R1B5 158 100% 0 0

Chromosomal Locations for CCDS 23226.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 57602237 57602461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 57604717 57604804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 57605981 57606144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (477 nt):
ATGGCGTTCATGGTGAAGTCCATGGTGGGTGGCCAACTGAAGAACCTCACAGGGAGCCTGGGGGGCGGCG
AGGACAAGGGGGACGGAGACAAGTCTGCAGCCGAAGCACAGGGCATGAGCCGAGAAGAGTACGAGGAGTA
TCAGAAGCAACTGGTGGAGGAGAAGATGGAGCGAGATGCACAGTTCACACAGAGGAAGGCAGAGCGGGCC
ACACTGCGAAGTCACTTCAGAGACAAATACCGTCTGCCCAAGAACGAAACAGATGAAAGCCAGATCCAGC
TGGCAGGCGGAGATGTGGAGCTGCCTCGGGAGCTAGCCAAGATGATCGAGGAGGATACGGAGGAAGAGGA
GGATAAGGCCTCTGTGCTCGGGCAGCTGGCCAGCCTCCCTGGCCTAGACCTCAGCTCACTCAAGGACAAA
GCCCAGACTACACTAGGGGACCTCAAGCAATCAGCTGAGAAGTGCCATATCATGTGA

Translation (158 aa):
MAFMVKSMVGGQLKNLTGSLGGGEDKGDGDKSAAEAQGMSREEYEEYQKQLVEEKMERDAQFTQRKAERA
TLRSHFRDKYRLPKNETDESQIQLAGGDVELPRELAKMIEEDTEEEEDKASVLGQLASLPGLDLSSLKDK
AQTTLGDLKQSAEKCHIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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