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Report for CCDS9254.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9254.1 Public Homo sapiens 12 ATP6V0A2 24 110 108 CCDS HistoryNCBI Gene:23545Re-query CCDS DB by CCDS ID:9254.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9254.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330342.8 ENSP00000332247.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330342.8Link to Ensembl Protein Viewer:ENSP00000332247.2Re-query CCDS DB by Nucleotide ID:ENST00000330342Re-query CCDS DB by Protein ID:ENSP00000332247
Original member Current member NCBI NM_012463.4 NP_036595.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012463.4Link to Protein Sequence:NP_036595.2Re-query CCDS DB by Nucleotide ID:NM_012463Re-query CCDS DB by Protein ID:NP_036595Link to BLAST:NP_036595.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036595.2 856 Q9Y487 856 100% 0 0

Chromosomal Locations for CCDS 9254.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 123712566 123712682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123718623 123718701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123722351 123722448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123724654 123724791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123726197 123726285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123727783 123727909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123733926 123734008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123735531 123735624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123737059 123737271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123743785 123743935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123744201 123744337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123744597 123744784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123744882 123744972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123747607 123747725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123748575 123748785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123751110 123751229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123752283 123752402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123754420 123754537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123756815 123756986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123757927 123758032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2571 nt):
ATGGGGTCCCTGTTCCGGAGCGAGACCATGTGCCTGGCGCAGCTCTTCCTGCAGTCGGGCACGGCCTACG
AGTGCCTCAGCGCCCTGGGCGAGAAAGGCCTGGTCCAGTTCCGAGACCTCAACCAGAACGTAAGTTCTTT
CCAAAGAAAATTTGTTGGTGAGGTGAAGAGGTGTGAAGAGCTAGAGCGAATATTGGTGTATTTGGTACAG
GAAATTAATAGAGCTGATATTCCCCTTCCTGAAGGAGAGGCCAGCCCTCCTGCGCCACCCCTGAAACAGG
TTCTAGAAATGCAGGAGCAGTTGCAGAAGCTCGAGGTTGAACTGAGAGAAGTCACTAAGAACAAGGAGAA
ACTGAGGAAAAACTTGCTGGAACTGATAGAGTACACTCACATGCTGAGAGTGACAAAGACCTTTGTGAAA
CGCAATGTTGAGTTTGAACCCACTTATGAAGAATTCCCTTCCTTAGAGAGTGATTCTTTGTTGGATTACA
GCTGTATGCAGAGGCTGGGAGCAAAACTGGGATTTGTGTCTGGCCTAATTAACCAAGGAAAAGTGGAAGC
ATTTGAAAAAATGTTGTGGAGAGTCTGCAAAGGGTACACCATCGTGTCCTATGCAGAACTGGATGAATCC
CTTGAAGACCCTGAAACAGGGGAAGTCATAAAATGGTATGTCTTTTTAATATCCTTTTGGGGAGAGCAGA
TTGGCCACAAGGTTAAGAAGATATGTGATTGCTACCACTGCCACGTGTACCCCTATCCAAACACAGCCGA
GGAGCGGAGGGAGATCCAGGAGGGGCTGAACACCCGCATCCAGGATCTCTACACTGTACTGCACAAAACC
GAGGACTATTTGAGGCAAGTGCTATGTAAAGCCGCCGAGTCTGTCTACAGCCGTGTGATCCAGGTGAAGA
AAATGAAGGCCATCTATCACATGCTGAACATGTGCAGCTTTGACGTGACCAACAAGTGCCTCATTGCTGA
GGTCTGGTGTCCCGAGGCGGATCTGCAGGACCTGCGCCGGGCACTGGAGGAGGGCTCGAGAGAGAGTGGT
GCTACAATCCCCTCATTCATGAATATAATCCCCACAAAAGAAACACCCCCCACTCGGATCCGCACCAACA
AATTCACCGAGGGATTTCAGAACATCGTGGATGCTTATGGAGTCGGAAGCTACAGAGAAGTCAATCCAGC
TCTCTTTACCATCATCACCTTCCCGTTTTTATTTGCTGTGATGTTTGGAGACTTCGGACATGGCTTTGTG
ATGTTTTTATTTGCCCTCTTGTTGGTGTTAAATGAAAATCATCCCAGACTAAATCAGTCACAAGAGATCA
TGAGGATGTTTTTTAATGGCCGGTACATCCTCCTGCTGATGGGGCTGTTCTCAGTGTACACTGGCCTCAT
CTACAACGACTGCTTTTCAAAGTCAGTCAACCTGTTCGGCTCTGGGTGGAACGTGTCGGCCATGTACAGC
TCCAGCCACCCACCCGCAGAGCATAAGAAGATGGTGCTTTGGAATGACAGCGTCGTTAGACACAACAGCA
TTTTGCAGCTGGATCCAAGCATTCCTGGAGTGTTCCGAGGCCCTTATCCCCTTGGCATTGATCCTATTTG
GAACTTGGCCACAAATCGCCTCACTTTTCTAAACTCTTTCAAAATGAAAATGTCCGTGATTTTAGGAATC
ATTCATATGACTTTTGGAGTCATTCTGGGAATATTTAACCACTTGCACTTCAGGAAGAAGTTCAACATTT
ACCTGGTTTCCATCCCGGAACTTCTCTTCATGCTCTGTATCTTTGGATACCTTATATTTATGATTTTCTA
CAAGTGGCTGGTTTTTTCAGCAGAAACCTCCAGAGTTGCTCCCAGCATTCTGATTGAATTTATTAACATG
TTTTTATTCCCAGCCAGTAAAACAAGTGGCCTTTACACAGGGCAGGAGTATGTCCAGAGAGTGCTGCTGG
TTGTCACAGCATTGTCTGTCCCTGTCCTCTTCTTGGGAAAGCCACTGTTTTTGTTGTGGCTTCACAATGG
GCGTAGTTGCTTCGGGGTGAACCGGAGTGGCTACACACTTATAAGGAAAGATAGTGAGGAAGAAGTTTCA
TTGCTGGGAAGCCAAGATATAGAAGAGGGAAATCACCAGGTGGAAGATGGATGTAGAGAAATGGCGTGTG
AAGAGTTTAATTTTGGAGAAATATTAATGACCCAAGTAATCCATTCCATCGAGTACTGTCTGGGATGCAT
CTCCAACACCGCCTCCTACCTGAGGCTCTGGGCGCTTAGCCTGGCTCACGCACAGTTGTCTGATGTCCTG
TGGGCCATGCTGATGCGCGTGGGCCTCCGCGTTGACACCACCTATGGCGTCTTGCTACTGCTCCCGGTTA
TCGCGCTCTTTGCAGTTTTGACCATTTTCATCCTTCTGATCATGGAAGGGCTTTCTGCGTTTCTTCACGC
CATACGCCTCCACTGGGTAGAATTTCAGAACAAATTCTACGTTGGTGCAGGCACCAAATTTGTTCCTTTC
TCATTCAGTCTACTTTCATCAAAGTTCAATAACGACGACAGTGTGGCATGA

Translation (856 aa):
MGSLFRSETMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELERILVYLVQ
EINRADIPLPEGEASPPAPPLKQVLEMQEQLQKLEVELREVTKNKEKLRKNLLELIEYTHMLRVTKTFVK
RNVEFEPTYEEFPSLESDSLLDYSCMQRLGAKLGFVSGLINQGKVEAFEKMLWRVCKGYTIVSYAELDES
LEDPETGEVIKWYVFLISFWGEQIGHKVKKICDCYHCHVYPYPNTAEERREIQEGLNTRIQDLYTVLHKT
EDYLRQVLCKAAESVYSRVIQVKKMKAIYHMLNMCSFDVTNKCLIAEVWCPEADLQDLRRALEEGSRESG
ATIPSFMNIIPTKETPPTRIRTNKFTEGFQNIVDAYGVGSYREVNPALFTIITFPFLFAVMFGDFGHGFV
MFLFALLLVLNENHPRLNQSQEIMRMFFNGRYILLLMGLFSVYTGLIYNDCFSKSVNLFGSGWNVSAMYS
SSHPPAEHKKMVLWNDSVVRHNSILQLDPSIPGVFRGPYPLGIDPIWNLATNRLTFLNSFKMKMSVILGI
IHMTFGVILGIFNHLHFRKKFNIYLVSIPELLFMLCIFGYLIFMIFYKWLVFSAETSRVAPSILIEFINM
FLFPASKTSGLYTGQEYVQRVLLVVTALSVPVLFLGKPLFLLWLHNGRSCFGVNRSGYTLIRKDSEEEVS
LLGSQDIEEGNHQVEDGCREMACEEFNFGEILMTQVIHSIEYCLGCISNTASYLRLWALSLAHAQLSDVL
WAMLMRVGLRVDTTYGVLLLLPVIALFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPF
SFSLLSSKFNNDDSVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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