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Report for CCDS36732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36732.1 Under review, update Mus musculus 13 Zfp72 23 108 98 CCDS HistoryNCBI Gene:238722Re-query CCDS DB by CCDS ID:36732.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 36732.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091481.2 ENSMUSP00000089063.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091481.2Link to Ensembl Protein Viewer:ENSMUSP00000089063.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000091481Re-query CCDS DB by Protein ID:ENSMUSP00000089063
Original member Current member EBI ENSMUST00000223163.2 ENSMUSP00000152502.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000223163.2Link to Ensembl Protein Viewer:ENSMUSP00000152502.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000223163Re-query CCDS DB by Protein ID:ENSMUSP00000152502
Original member NCBI NM_001081680.1 NP_001075149.1 Updated not alive Link to Nucleotide Sequence:NM_001081680.1Link to Protein Sequence:NP_001075149.1Re-query CCDS DB by Nucleotide ID:NM_001081680Re-query CCDS DB by Protein ID:NP_001075149
NCBI NM_001081680.2 NP_001075149.1 Removed not alive Link to Nucleotide Sequence:NM_001081680.2Link to Protein Sequence:NP_001075149.1Re-query CCDS DB by Nucleotide ID:NM_001081680Re-query CCDS DB by Protein ID:NP_001075149Link to BLAST:NP_001075149.1
Current member NCBI NM_001374038.3 NP_001360967.2 Pending alive Link to Nucleotide Sequence:NM_001374038.3Link to Protein Sequence:NP_001360967.2Re-query CCDS DB by Nucleotide ID:NM_001374038Re-query CCDS DB by Protein ID:NP_001360967Link to BLAST:NP_001360967.2

Chromosomal Locations for CCDS 36732.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 74371650 74372827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 74374968 74375063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 74376436 74376469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1308 nt):
ATGTTGGAGAATTACAGCAACCTTGTCTCTCTGGGTCTTGCTTTCTCTAAGCCCTATCTGGTCACATTTC
TGGAAAAAAGACAACAGTCTTGGGATGTGAAACAACAAGCAACAGTGGCTACATACCCAGGAACAAAACC
CTATAAATATAAAGAATGTAACAAGACCTTTGTTCGGAAGTCACTCCTTATTCAACATCAGAGAGTTCAT
ACAGGAGAGAAACCCTACAAATGTGAACAATGTGGCAAAGCTTTTAGCTGTTCTTCAAGCCTTACCCCAC
ATCAAAGAATTCACACTGGAGAGAAACCCTACAAATGTGAACAGTGTGGTCAGGCTTTTAACTGTTCTTC
TCACCTGTATAAGCATCAGAGAATTCACACTGGTGAGAAACCCTATAAATGCCCAGAATGTGGCAAAGCT
TTTAACTGGTCTTCAAGCCTTACCCAGCATCAAAGAATTCACAGCGGAGAGAAACCCTACAAATGTGAAG
AATGTGGCTTGTCCTTTAACTGTTCTCACCTGTATAGGCACCAGAGAATTCACACGGGTGAAAAACTTTA
CAAATGCGAAGAATGTGGCAAGGCCTTCAACTGTTCTTCATATCTTAATTACCATCAGATACTTCATACT
GGTGATAAACCCTACAAATGTAGAGAATGTGGCAAAGCCTTTACCATGGTTTCTTACCTTACTCGACACC
AGAGAATTCATACTGGAGAAAAACCCTATAAATGTAAAGAATGTGACAAAGCTTTTAGCAATTGTTCAGC
ACTAATTCAACACCAAAGAATTCATACTGGAGAGAAACCCTACAAATGCAGCGAATGTGGCAAAGCCTTT
AATAATAGTTCAAGCCTCACTCATCACCAAAGAATTCACACTGGAGAGAAACCTTATGAGTGCAAAGAAT
GTGGCAAGGCCTTTAACTCTTCTTCACACCTTAATTATCATCACAGAATTCATACTGGAGAGAAACCCTA
TAAATGTGAAGAATGTAGCAAAGCCTTTAATAATTTTTCAGCCCTTATTCAACACCAAAGAATTCATACT
GGAGAGAAACCCTACAAGTGTGAAAAATGTAGCAAAGCATTTAATAATTGTTCAGCTCTTAGTCAGCACC
AAAGAATCCATACTGGAGAGAAACCCTATAAGTGTGAAAAATGCGGACAGGGCTTTAACTGTTCTTCAAA
CCTTAAACAACACCAAAGAATTCATACTAGAGAAAAACTCTACAGCTGTGAAGATTCTGGGAAAGCCTTT
AATAATGGGGAAGCCCTTCCTCAATACCATAGAATCCATACGTACTAA

Translation (435 aa):
MLENYSNLVSLGLAFSKPYLVTFLEKRQQSWDVKQQATVATYPGTKPYKYKECNKTFVRKSLLIQHQRVH
TGEKPYKCEQCGKAFSCSSSLTPHQRIHTGEKPYKCEQCGQAFNCSSHLYKHQRIHTGEKPYKCPECGKA
FNWSSSLTQHQRIHSGEKPYKCEECGLSFNCSHLYRHQRIHTGEKLYKCEECGKAFNCSSYLNYHQILHT
GDKPYKCRECGKAFTMVSYLTRHQRIHTGEKPYKCKECDKAFSNCSALIQHQRIHTGEKPYKCSECGKAF
NNSSSLTHHQRIHTGEKPYECKECGKAFNSSSHLNYHHRIHTGEKPYKCEECSKAFNNFSALIQHQRIHT
GEKPYKCEKCSKAFNNCSALSQHQRIHTGEKPYKCEKCGQGFNCSSNLKQHQRIHTREKLYSCEDSGKAF
NNGEALPQYHRIHTY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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