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Report for CCDS12297.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12297.1 Public Homo sapiens 19 MRI1 24 110 108 CCDS HistoryNCBI Gene:84245Re-query CCDS DB by CCDS ID:12297.1Re-query CCDS DB by GeneID:84245See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12297.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319545.12 ENSP00000314871.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000319545.12Link to Ensembl Protein Viewer:ENSP00000314871.7Re-query CCDS DB by Nucleotide ID:ENST00000319545Re-query CCDS DB by Protein ID:ENSP00000314871
Original member Current member NCBI NM_032285.4 NP_115661.1 Accepted alive Link to Nucleotide Sequence:NM_032285.4Link to Protein Sequence:NP_115661.1Re-query CCDS DB by Nucleotide ID:NM_032285Re-query CCDS DB by Protein ID:NP_115661Link to BLAST:NP_115661.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115661.1 322 Q9BV20-2 322 100% 0 0

Chromosomal Locations for CCDS 12297.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13764589 13764720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13764871 13765109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13768359 13768447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13768615 13768737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13768824 13769048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13772121 13772281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGACCCTGGAGGCGATCCGCTACTCGCGGGGCTCCCTGCAGATCCTAGACCAGCTGCTGCTGCCCAAGC
AGAGCCGCTACGAGGCGGTGGGCTCGGTGCACCAGGCCTGGGAGGCCATCCGCGCCATGAAGGTGCGGGG
CGCCCCGGCCATAGCCCTGGTGGGCTGTCTCAGCCTCGCCGTGGAGCTGCAGGCGGGCGCCGGGGGACCG
GGACTCGCCGCGCTCGTGGCCTTCGTGCGCGACAAGCTGAGCTTCCTCGTCACCGCCCGGCCCACCGCTG
TCAACATGGCCCGCGCCGCCCGCGACCTGGCTGATGTTGCAGCCCGGGAGGCCGAACGGGAGGGCGCTAC
GGAAGAGGCGGTCCGGGAGAGACGTGAAACGGAGCTATGCGAGCATTGGGAAGAGCATACCAGGCAGAGG
GAACTGCCACTGCGAGGGCCCCTGGGCGGGACTGTGCTCGAGACCCGGCCCTACAACCAGGGAGCCCGGC
TGACGGCCTTTGAGCTGGTCTATGAGCAGATCCCCGCCACCCTTATCACCGACAGCATGGTGGCTGCTGC
CATGGCCCATAGGGGCGTGTCAGCTGTGGTCGTGGGAGCTGACCGCGTGGTTGCCAACGGCGACACAGCC
AACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTTCTACGTGGCTGCCC
CCAGCTCTTCATGTGACCTCCGTCTGGAGACCGGCAAGGAGATCATTATTGAAGAGCGACCGGGCCAGGA
GCTGACCGATGTTAATGGGGTCCGGATTGCAGCACCTGGGATTGGAGTTTGGAATCCTGCCTTCGATGTC
ACCCCCCACGACCTCATCACTGGTGGCATCATCACAGAACTGGGGGTCTTTGCCCCTGAGGAGCTCCGGA
CAGCCCTAACCACCACCATCTCTTCCAGGGATGGAACCCTAGATGGACCCCAGATGTAA

Translation (322 aa):
MTLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGP
GLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERRETELCEHWEEHTRQR
ELPLRGPLGGTVLETRPYNQGARLTAFELVYEQIPATLITDSMVAAAMAHRGVSAVVVGADRVVANGDTA
NKVGTYQLAIVAKHHGIPFYVAAPSSSCDLRLETGKEIIIEERPGQELTDVNGVRIAAPGIGVWNPAFDV
TPHDLITGGIITELGVFAPEELRTALTTTISSRDGTLDGPQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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