NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS29266.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29266.1 Public Mus musculus 18 Adamts19 23 108 98 CCDS HistoryNCBI Gene:240322Re-query CCDS DB by CCDS ID:29266.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29266.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052907.6 ENSMUSP00000050535.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052907.6Link to Ensembl Protein Viewer:ENSMUSP00000050535.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000052907Re-query CCDS DB by Protein ID:ENSMUSP00000050535
Original member Current member NCBI NM_175506.4 NP_780715.1 Accepted alive Link to Nucleotide Sequence:NM_175506.4Link to Protein Sequence:NP_780715.1Re-query CCDS DB by Nucleotide ID:NM_175506Re-query CCDS DB by Protein ID:NP_780715Link to BLAST:NP_780715.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780715.1 1210 P59509 1210 100% 0 0

Chromosomal Locations for CCDS 29266.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 58836807 58836894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58837434 58838083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58890273 58890438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58900859 58901031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58902102 58902185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58902906 58903063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58927256 58927299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58942398 58942503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58952344 58952484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58954510 58954660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58963461 58963562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58968723 58968853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58969883 58970055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58972702 58972829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58985241 58985361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 58988944 58989024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 59007328 59007485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 59011003 59011156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 59024447 59024582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 59031773 59031977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 59032888 59033040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 59048794 59048971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 59052537 59052688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3633 nt):
ATGGGCCCGGAGATGCGCCTGACTCGCATCTGCTGCTGCTGCTGCCTCCTCTACCAGCTAGGCTTCCTGT
CGCATGGGACCACCTCAGGGTTGCAGCTCACCCCGGATCTCGAGGAATGGGAAGTCGTGTTTCCTGCACT
CTGGCGCCGGGAGTCGCTGAACGCCACGGGCCTCAGCGGGGGCAGCTCAGACCCGGGATCCGGGCGCAGC
TCTGGGGGCGGCGGCCGGGGGCAGGCTTCGGGCAGCTCGCGGGAGGTGCGCTCGGTGGCCCGAGCACCGC
AGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGGTGCTGAGGACGA
GGAGGAACTCGAATCTCAGGAGCTGCCTCGGGGATCCAGCGGAGATACTGCCCTGTCCTCGGGAACCCCG
GCCTCGTGGCAGCCTCCTCTGCCCCCGCAACGGCCCTCGTCCCCGCCCCCTGCCCAGCAAGAGGAACCCA
GCGCGGAGGAGGTGCTGTTGCGGATCCCGGCCCTCTCCCGGGACCTGTACCTGCTGCTCCGGAGAGATGG
CCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACG
GCTGACCCTGGCTCTTCCTTGCTGCCAGATGCCTCCTGCTTTTACACCGGGACAGTGCTGCGCCATCCTG
GCTCTCTGGCCTCTTTCAGCACCTGTGGAGGTGGCCTGATGGGCTTTATACAGCTCAATGAGGACTTCCT
ATTCATTGAGCCATTCAATGATACAATGGCCATCATAGGTCACCCGCACCGTTTATACAGGCAGAAGAGG
TCCACAGAGGAAAAAGTAACAGAGAACTCAGCTGTTCACCGCCATCACTGTGGTGTCATTTCAGATAAAG
GAAGACCAAGGTCTAAAAAAATAGCAGACAACAGACGAGAAAAACGGTATTCCTACAAATTATCCCAGGA
ATACAACATCGAGACCGTAGTAGTTGCAGACCCTGCAATGGTTTCCTACCACGGAGCAGATGCAGCCAGG
AGATTCATTCTGACAATCCTAAATATGGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCA
ACCTCCGTGTGCTAAAGCTCATTCTCCTCCATGAAACACCAGCAGATCTGTATATTGGGCACCACGGAGA
GAAAATGCTGGAGAGTTTTTGTAAGTGGCAGCACGAAGAGTTTGGCCGGAGGAATGATGTGCATTTGGAG
ATGTCGACCAGCTGGGGAGAAGACATTGCTGCGGTGGATGCAGCTATTCTTATAACAAGGAAAGATTTCT
GTGTGCACAAAGATGAGCCATGTGACACTGTGGGTATTGCTTACTTGAATGGAATGTGTAGTGAAAAGAG
GAAGTGTATTATTGCTGAAGACAACGGCCTGAACCTTGCGTTTACAATCGCTCATGAAATGGGTCACAAC
ATGGGCATCAACCATGACAATGACCACCCATCCTGTGCTGATGGTCTTCATATCATGTCTGGTGAATGGA
TCAAAGGACAAAATCTTGGTGATGTTTCATGGTCCAGGTGCAGCAAGGAGGATCTGGAAAGATTTCTCAG
GTCAAAGGCCAGTAGCTGCTTGTTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAA
TTGCCAGGGATGGCTTACACTGCAGACGAACAGTGCCAGATCCTCTTTGGGCCTCTGGCTTCTTTTTGTC
AAGAGATGCAGCATGTTATCTGCACTGGTTTGTGGTGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAA
GCTGGACCCACCAATGGATGGGACTGACTGCGACCCTGGCAAGTGGTGTAAGGCTGGAGAATGCACCCGC
AGGACTCCTGCACCCGAGCACTTGGCTGGAGAGTGGAGCCCGTGGAGTTCCTGTAGTCGAAGTTGCAGTT
CTGGGGTCAGCAGTCGAGAGCGCAAGTGTCCTGGGCTAGGTTCTGAAGCAAGGGATTGTAATGGCCCCAG
AAAACAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGT
CAGGCCTATAGTGTTAGAACTTCGTACCCAAAGCATGCACTTCAGTGGCAAGCTGTCTTCGATGAAGAAA
AACCATGTGCCTTGTTTTGCTCTCCTGTTGGAAAAGAACAGCCTGTTCTTCTATCAGAAAAAGTGATGGA
TGGAACTTCTTGTGGATATCAGGGACTAGATATATGTGCAAATGGCAGGTGCCAGAAAGCTGGTTGTGAT
GGTTTACTGGGGTCTCTTGCCAGGGAAGATCATTGTGGTGTTTGTAACGGCAATGGAAAGTCATGCAAAG
TCATTAAAGGCGATTTTAATCACACCAGAGGGGCAGGTTATGTAGAAGTTCTGGTGATACCTGCTGGAGC
GAGAAGAATCAAAGTTGTGGAGGAAAAGCCGGCACATAGCTTCTTAGCTCTTCGAGATGCCAGTAAGCAG
TCTATAAACAGTGACTGGAAGATAGAACATTCTGGAGCATTCAGTCTGGCTGGAACTACAGTACATTACT
TAAGACGAGGCCTGTGGGAGAAGATCTCTGCCAAAGGTCCCACAACCACACCTTTGCATCTCCTGGTACT
CCTATTTCAAGATCAGAATTACGGTCTTCACTATGAATATACTGTTCCATCAGACCCTCTTCCAGACAAT
CAGAGTTCTAAGGAGCCGGGGCCCCTCTTCATGTGGACACACGCAGGCTGGGGCGATTGCAATGCCACGT
GTGGAGGAGGAGAGAGGAAGACAATGGTGTCCTGCACAAAAATCATGAGCAAGAATATCAGCCTTGTGGA
CAACAAGAAATGCAAGGACTTGACCAAACCAGAGCCACAGATTCGAAAGTGCAATGAACAACCTTGTCAA
ACAAGGTGGATGATGACAGAATGGACCACGTGTTCACGAACCTGTGGAAAAGGAGTCCAGAGTAGACAAG
TGGCCTGTACCCAGCAGCTGGAAAATGGAACCCTGATTAGAGCCTGGGAGAGGGACTGCCTAGGGCCAAA
GCCCGCAACTGTGCAACGCTGTGAGGGTCAGGACTGCATGACGGTGTGGGAGGCCGGAGTGTGGTCGGAG
TGCTCAGTGAAGTGTGGCAAAGGTGTGCGGCATCGCACCGTGAGGTGCACTAACCCGAGAAAAAAGTGCG
TCCTCTCCACCAGACCCAGGGAGGCCGAGGACTGTGAGGATTACTCCAAATGCTACGTGTGGCGAGTAGG
TGACTGGTCTAAGTGCTCCATTACCTGTGGCAAAGGCATGCAGTCTCGTGTTATCCAGTGCATGCATAAG
ATCACAGGAAGACACGGAAATGAATGCTTTTCTTCGGAGAAACCTGCAGCCTACAGGCCATGTCACCTTC
AGCCCTGTAATGAGAAAATTAATGTAAATACAATAACATCACCAAGACTGGCTGCCCTGACCTTCAAGTG
CCTGGGAGACCAGTGGCCAGTGTACTGCAGAGTGATCCGGGAGAAGAATCTTTGCCAGGACATGCGGTGG
TACCAACGATGCTGTGAGACTTGCAGGGACTTCTATGCCCAAAAGCTACAGCAGAAGAGTTGA

Translation (1210 aa):
MGPEMRLTRICCCCCLLYQLGFLSHGTTSGLQLTPDLEEWEVVFPALWRRESLNATGLSGGSSDPGSGRS
SGGGGRGQASGSSREVRSVARAPQEEATRGQSEPWFGSPLEPGAEDEEELESQELPRGSSGDTALSSGTP
ASWQPPLPPQRPSSPPPAQQEEPSAEEVLLRIPALSRDLYLLLRRDGRFLAQRFAVEQWPKPGPDPTRAT
ADPGSSLLPDASCFYTGTVLRHPGSLASFSTCGGGLMGFIQLNEDFLFIEPFNDTMAIIGHPHRLYRQKR
STEEKVTENSAVHRHHCGVISDKGRPRSKKIADNRREKRYSYKLSQEYNIETVVVADPAMVSYHGADAAR
RFILTILNMVFNLFQHKSLGVQVNLRVLKLILLHETPADLYIGHHGEKMLESFCKWQHEEFGRRNDVHLE
MSTSWGEDIAAVDAAILITRKDFCVHKDEPCDTVGIAYLNGMCSEKRKCIIAEDNGLNLAFTIAHEMGHN
MGINHDNDHPSCADGLHIMSGEWIKGQNLGDVSWSRCSKEDLERFLRSKASSCLLHTDPQSLSSVLVPSK
LPGMAYTADEQCQILFGPLASFCQEMQHVICTGLWCKVEGEAECRTKLDPPMDGTDCDPGKWCKAGECTR
RTPAPEHLAGEWSPWSSCSRSCSSGVSSRERKCPGLGSEARDCNGPRKQYRICENPPCPAGLPGFRDWQC
QAYSVRTSYPKHALQWQAVFDEEKPCALFCSPVGKEQPVLLSEKVMDGTSCGYQGLDICANGRCQKAGCD
GLLGSLAREDHCGVCNGNGKSCKVIKGDFNHTRGAGYVEVLVIPAGARRIKVVEEKPAHSFLALRDASKQ
SINSDWKIEHSGAFSLAGTTVHYLRRGLWEKISAKGPTTTPLHLLVLLFQDQNYGLHYEYTVPSDPLPDN
QSSKEPGPLFMWTHAGWGDCNATCGGGERKTMVSCTKIMSKNISLVDNKKCKDLTKPEPQIRKCNEQPCQ
TRWMMTEWTTCSRTCGKGVQSRQVACTQQLENGTLIRAWERDCLGPKPATVQRCEGQDCMTVWEAGVWSE
CSVKCGKGVRHRTVRCTNPRKKCVLSTRPREAEDCEDYSKCYVWRVGDWSKCSITCGKGMQSRVIQCMHK
ITGRHGNECFSSEKPAAYRPCHLQPCNEKINVNTITSPRLAALTFKCLGDQWPVYCRVIREKNLCQDMRW
YQRCCETCRDFYAQKLQQKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH