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Report for CCDS48338.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48338.1 Public Mus musculus 1 Serpinb10 23 108 98 CCDS HistoryNCBI Gene:241197Re-query CCDS DB by CCDS ID:48338.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48338.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000182198.7 ENSMUSP00000138771.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182198.7Link to Ensembl Protein Viewer:ENSMUSP00000138771.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182198Re-query CCDS DB by Protein ID:ENSMUSP00000138771
Original member Current member NCBI NM_001160307.1 NP_001153779.1 Accepted alive Link to Nucleotide Sequence:NM_001160307.1Link to Protein Sequence:NP_001153779.1Re-query CCDS DB by Nucleotide ID:NM_001160307Re-query CCDS DB by Protein ID:NP_001153779Link to BLAST:NP_001153779.1

Chromosomal Locations for CCDS 48338.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 107535508 107535510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107535993 107536130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107538427 107538544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107540888 107541030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107542192 107542347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 107546668 107547072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGGAATTTAACTCAGGCAAATTTGAAGAAATACAGTCCGACTTCCAGACCCTTGCTGCTGAAATCCTCA
AACCTGGAAATTCTTACGTTCTTAAAACAGCTAACAGGATATATGGAGAGAAAACATATCCATTTCATAA
TAAATATTTGGAGGACATGAAAACGTACTTTGGGGCAGAACCACAATCTGTTAACTTTGTTGAAGCTTCT
GGACAGATCAGGAAGGAGATCAACTCCTGGGTTGGAAGCCAGACTGGAGGTAAAATTCCAAATCTCCTCC
CAGATGACTCAGTCGACACCAAGACTAAAATGGTTCTGGTGAATGCCCTTTATTTTAAAGGAACCTGGGA
GCATCAGTTCTCAGTGAAAAGCACCACCGAAAGGCCTTTCAGAGTAAACAAGACCACAAGCAAACCAGTG
CAAATGATGTCAATGAAACAGAGTCTTCAAGTCTTCCACATTGAGGAGCTGCAAACCATAGGCCTTCAAC
TCCACTATCAGAACCGTGACCTCAGCCTGCTTCTACTGCTTCCAGAAGCAATAGATGGCCTGGAACAGCT
GGAGAGAGCCATTACCTATGAGAAACTAGATAAGTGGACCAGTGCAGACATGATGGACACATACGAAGTG
CAGCTGTACCTCCCCAAGTTCAAGATGGAGGAGAGTTATGACCTCAAGTCAGCCCTGAGAGGTATGGGAA
TGACCGACGTTTTCAGCCAGAGTAAAGCTGATTTCTCAAACATGACTTCAGAGAGAAATCTATTTTTGTC
CAATGTTTTCCATAAGACTTTTCTGGAAATAAATGAAGAAGGTACAGAAGCTGCAGCTGGCACTGGAAGT
GAAATCAGTGTTCGAATTAAGGCACCTTCCATTGAATTAAATGTAGATCATCCATTTCTATTTTTCATCA
GGCACAACAAAACCAAAAGCATTCTTTTTTGTGGAAGATTCTGCTCCCCCTAA

Translation (320 aa):
MEFNSGKFEEIQSDFQTLAAEILKPGNSYVLKTANRIYGEKTYPFHNKYLEDMKTYFGAEPQSVNFVEAS
GQIRKEINSWVGSQTGGKIPNLLPDDSVDTKTKMVLVNALYFKGTWEHQFSVKSTTERPFRVNKTTSKPV
QMMSMKQSLQVFHIEELQTIGLQLHYQNRDLSLLLLLPEAIDGLEQLERAITYEKLDKWTSADMMDTYEV
QLYLPKFKMEESYDLKSALRGMGMTDVFSQSKADFSNMTSERNLFLSNVFHKTFLEINEEGTEAAAGTGS
EISVRIKAPSIELNVDHPFLFFIRHNKTKSILFCGRFCSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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