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Report for CCDS32157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32157.1 Public Homo sapiens 14 WDR25 24 110 108 CCDS HistoryNCBI Gene:79446Re-query CCDS DB by CCDS ID:32157.1Re-query CCDS DB by GeneID:79446See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32157.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335290.10 ENSP00000334148.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335290.10Link to Ensembl Protein Viewer:ENSP00000334148.6Re-query CCDS DB by Nucleotide ID:ENST00000335290Re-query CCDS DB by Protein ID:ENSP00000334148
Original member Current member EBI ENST00000402312.8 ENSP00000385540.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402312.8Link to Ensembl Protein Viewer:ENSP00000385540.3Re-query CCDS DB by Nucleotide ID:ENST00000402312Re-query CCDS DB by Protein ID:ENSP00000385540
Original member Current member EBI ENST00000554998.5 ENSP00000450661.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554998.5Link to Ensembl Protein Viewer:ENSP00000450661.1Re-query CCDS DB by Nucleotide ID:ENST00000554998Re-query CCDS DB by Protein ID:ENSP00000450661
Original member Current member NCBI NM_001161476.3 NP_001154948.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001161476.3Link to Protein Sequence:NP_001154948.1Re-query CCDS DB by Nucleotide ID:NM_001161476Re-query CCDS DB by Protein ID:NP_001154948Link to BLAST:NP_001154948.1
Original member Current member NCBI NM_001350947.2 NP_001337876.1 Accepted alive Link to Nucleotide Sequence:NM_001350947.2Link to Protein Sequence:NP_001337876.1Re-query CCDS DB by Nucleotide ID:NM_001350947Re-query CCDS DB by Protein ID:NP_001337876Link to BLAST:NP_001337876.1
Original member Current member NCBI NM_001350948.2 NP_001337877.1 Accepted alive Link to Nucleotide Sequence:NM_001350948.2Link to Protein Sequence:NP_001337877.1Re-query CCDS DB by Nucleotide ID:NM_001350948Re-query CCDS DB by Protein ID:NP_001337877Link to BLAST:NP_001337877.1
Original member Current member NCBI NM_024515.6 NP_078791.3 Accepted alive Link to Nucleotide Sequence:NM_024515.6Link to Protein Sequence:NP_078791.3Re-query CCDS DB by Nucleotide ID:NM_024515Re-query CCDS DB by Protein ID:NP_078791Link to BLAST:NP_078791.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001154948.1 544 Q64LD2-1 544 100% 0 0
NP_001337876.1 544 Q64LD2-1 544 100% 0 0
NP_001337877.1 544 Q64LD2-1 544 100% 0 0
NP_078791.3 544 Q64LD2-1 544 100% 0 0

Chromosomal Locations for CCDS 32157.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 100380925 100381746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100468021 100468168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100483994 100484124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100525870 100526040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100529068 100529208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100529820 100530041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGACAGCAAGAACTCTGTCTTTAATGGCTTCATTGGTAGCGTATGATGATTCGGACTCGGAGGCTGAGA
CAGAGCATGCAGGAAGTTTTAATGCTACCGGCCAGCAGAAAGACACTTCTGGTGTGGCCAGACCACCTGG
GCAGGATTTTGCATCTGGTACACTGGATGTGCCCAAAGCAGGGGCACAGCCCACAAAGCATGGCTCCTGT
GAAGACCCAGGGGGCTATCGCCTTCCATTGGCTCAGCTTGGGAGAAGCGATTGGGGATCTTGCCCCAGCC
AGAGGCTACAGTGGCCCGGGAAGGAGCCTCAAGTCACCTTCCCCATCAAAGAGCCTTCTTGTTCTTCTCT
GTGGACGAGCCATGTTCCAGCCAGCCACATGCCCCTGGCAGCTGCCCGCTTTAAGCAAGTAAAACTCTCC
AGGAACTTTCCCAAGTCATCTTTCCATGCTCAAAGTGAGTCTGAAACCGTAGGTAAAAATGGCAGCTCTT
TTCAGAAGAAAAAATGTGAGGACTGTGTGGTACCCTATACTCCCAGAAGACTAAGACAGCGGCAGGCATT
AAGCACGGAGACAGGCAAGGGTAAAGACGTGGAGCCACAGGGGCCCCCTGCAGGGCGTGCCCCAGCCCCT
CTCTACGTGGGCCCGGGAGTGTCTGAGTTTATTCAGCCATATTTGAATAGCCATTATAAAGAAACCACAG
TTCCCCGGAAAGTGCTTTTCCACCTGAGAGGCCACAGGGGCCCTGTCAACACCATTCAGTGGTGTCCAGT
CCTTTCTAAGAGCCACATGCTTCTCTCCACTTCTATGGATAAAACTTTCAAGGTATGGAACGCCGTGGAC
TCCGGGCACTGCCTGCAGACCTACTCCCTGCACACAGAGGCAGTGCGGGCCGCCCGGTGGGCTCCCTGTG
GCCGGCGCATCCTCAGTGGTGGCTTTGACTTCGCGCTGCACCTAACAGACCTTGAAACAGGAACCCAGCT
ATTTAGTGGTCGAAGTGACTTTAGAATCACTACCTTGAAATTCCATCCAAAAGACCACAACATCTTTTTA
TGTGGAGGCTTCAGCTCTGAAATGAAAGCTTGGGATATAAGGACTGGCAAGGTGATGAGAAGCTACAAGG
CGACCATCCAGCAGACCTTGGACATCCTGTTCCTCCGGGAAGGCTCCGAGTTCCTGAGCAGCACAGACGC
TTCCACCCGGGACTCAGCTGACCGCACCATTATTGCCTGGGATTTCCGGACCTCTGCCAAAATCTCCAAC
CAGATTTTCCACGAGAGGTTCACCTGCCCCAGCCTCGCCTTGCACCCGAGAGAGCCCGTGTTCCTGGCAC
AGACCAATGGCAACTACCTGGCCCTTTTCTCCACTGTGTGGCCCTACCGGATGAGCAGACGGCGGCGCTA
TGAAGGGCACAAGGTGGAGGGCTACTCAGTGGGCTGCGAGTGCTCCCCAGGCGGTGACTTGCTGGTGACG
GGCAGCGCCGATGGCCGGGTCCTGATGTACAGCTTCCGCACAGCCAGCCGAGCATGCACACTGCAGGGGC
ACACACAGGCCTGTGTCGGCACCACCTATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTGGGG
AGGGGACATGAAGATCTGGCACTGA

Translation (544 aa):
MTARTLSLMASLVAYDDSDSEAETEHAGSFNATGQQKDTSGVARPPGQDFASGTLDVPKAGAQPTKHGSC
EDPGGYRLPLAQLGRSDWGSCPSQRLQWPGKEPQVTFPIKEPSCSSLWTSHVPASHMPLAAARFKQVKLS
RNFPKSSFHAQSESETVGKNGSSFQKKKCEDCVVPYTPRRLRQRQALSTETGKGKDVEPQGPPAGRAPAP
LYVGPGVSEFIQPYLNSHYKETTVPRKVLFHLRGHRGPVNTIQWCPVLSKSHMLLSTSMDKTFKVWNAVD
SGHCLQTYSLHTEAVRAARWAPCGRRILSGGFDFALHLTDLETGTQLFSGRSDFRITTLKFHPKDHNIFL
CGGFSSEMKAWDIRTGKVMRSYKATIQQTLDILFLREGSEFLSSTDASTRDSADRTIIAWDFRTSAKISN
QIFHERFTCPSLALHPREPVFLAQTNGNYLALFSTVWPYRMSRRRRYEGHKVEGYSVGCECSPGGDLLVT
GSADGRVLMYSFRTASRACTLQGHTQACVGTTYHPVLPSVLATCSWGGDMKIWH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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