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Report for CCDS49652.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49652.1 Public Mus musculus 15 Mroh1 23 108 98 CCDS HistoryNCBI Gene:223658Re-query CCDS DB by CCDS ID:49652.1Re-query CCDS DB by GeneID:223658See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49652.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092595.10 ENSMUSP00000090256.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092595.10Link to Ensembl Protein Viewer:ENSMUSP00000090256.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000092595Re-query CCDS DB by Protein ID:ENSMUSP00000090256
Original member Current member EBI ENSMUST00000161305.7 ENSMUSP00000154882.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161305.7Link to Ensembl Protein Viewer:ENSMUSP00000154882.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161305Re-query CCDS DB by Protein ID:ENSMUSP00000154882
Original member Current member NCBI NM_001162489.1 NP_001155961.1 Accepted alive Link to Nucleotide Sequence:NM_001162489.1Link to Protein Sequence:NP_001155961.1Re-query CCDS DB by Nucleotide ID:NM_001162489Re-query CCDS DB by Protein ID:NP_001155961Link to BLAST:NP_001155961.1

Chromosomal Locations for CCDS 49652.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76392438 76392459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76393803 76393948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76401576 76401707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76402133 76402295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76402483 76402581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76407892 76408043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76408388 76408528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76408883 76408975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76412902 76412980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76414219 76414332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76421140 76421213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76423716 76423835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76427109 76427216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76427512 76427656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76427902 76427942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76428244 76428385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76428649 76428701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76429153 76429260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76429788 76429907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76430177 76430299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76432149 76432295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76433274 76433396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76433538 76433617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76433827 76433941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76434063 76434158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76434683 76434787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76435770 76435905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76436005 76436117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76437238 76437390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76438031 76438072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3285 nt):
ATGACCAGGCCCTACATAAAGAGGCTGTCCTTCACCCTCCTGGACTCCATCACTGACAAGGATCCTATGG
TCCAGGAGCAGGTCTGCAGTGCACTCTGTTCCCTTGGAGACGCGCAGCCAGACGAGACACTCCATGCCTG
TGAGGAGTACCTACGGCAGCATGACAAGCTGGCTCACCCGTACCGTACGAAGATCCTGAGGGCCATGGAG
ACAGTACTAAGCAGTCATATCCATGACCTGGACAAGGACACTGCCGGCGCTGTCATCCTCCTGGCTACCA
GCGAGATGACAAGGACCAAGGAGCTGGACTGTGACTGGCAGCAGGCTGCAGGCAGTGTCCTGGTGGCTGT
TGGCAAGCGATTCACCAACCAGGTGATGGAGGAGGTGCTCAGCCGGTTCCAGCCTGGGATGCTGCCCCAC
TCCTCCGTGCTGCACACACTCGCCAACCTCTCAGTGTCCAACGCATTTGATATGGTTCCTTTTCTGCCGT
CCATCCTGAGCACCATGCTGCCTATGCTGAGCATGGCCAAGCAGGACGCGCTGAAGGTGGTGTTCTGCGG
CGCTCTCCAGCACTTCAGCGAAAGCATCTTGGAATACCTGGCCAACCTGGACCAGGCCCCAGACCCCACA
GTGAGGAAGGACACCTTTGGGGCTGACATCTTTGGCGCCTATGATGTTCTCTTCCACCACTGGCTGCAGA
GCCGAGATGCCAAGCTCCGGCTTGCCGTGGTGGCGGCTCTGGGTCCCATGAGCCACCTGCTTCCCAGTGA
GAGGCTGGAAGAACAGCTCCCTAAGCTCCTCCCTGCAGTCCTCGGCCTCTACAAGAAGCATGCGGAGGCC
TTTCAGATATCGAAGAGCCTGGGCCAGATTCTCGAGGCAGCTGTGAACGTGAGCAGCCGTACCCTGGAGG
TTCAGCTTGATGCCCTCCTGGTGGCTCTTCATGCTCAGATTTGTGTGCCTGTGGAGTCCTCGAGCCCCCT
GGTGATGAACAGCCAGAAGGAGGTGCTTCGCTGCTTCACAGTGCTGGCCTGCTGCTCTCCTGACCGTCTG
CTGGCCTTCTTACTGCCCAGGCTGGACACCAGCAACGAGAGGCTCCGCGTGGGTACCCTGCAGATCCTGA
GACACATCATCAACTCGGCTGCCGCTCAGATGGAGGCTAAGCAGCCCTTTATCCTCTCCTCCATGAGGCT
GCCTCTTCTGGACACCAACGATAAGGTGAAACGGGCTGTGGTGCAGGTGATCAGTGCCATGGCCCACCAC
GGCTACTTGGAGCAGCCTGGAGGAGAGGTGATGGTTGAGTATATTGTGCAGCAGTGCGCCCTGCCCGCCG
AGGAGCCTGAGAAGCCTGGCCCTGATGGGGAGGACCTGGCGGCAGATAGCGTGCGGGCTGTCAGTATCCG
CACCCTCTACCTGGTCAGCACCACAGTGGATAGGATGAACAGTGTTCTCTGGCCCTACCTCCTCGAGTTC
CTCACCCCGGTGCGCTTCACTGCGGCCCTCACCCCGCTCTGCAGGAGCCTTGTGCACTTAGCCCTGAAGA
GGCAGGAGGCTGGGGCAGATGATTTCCTCATCCAGTACAACGCGAATGCAAACCTCCCGTCTCCCTTCGC
TATGACCACACGACTGCTGGTTGTGTCTTCTAATCCCTACCTGGGAGATGGGCGTGGAGCGGCCTCCCTG
CGCCTCCTGAAGGTTATGCATCAGAATATCCACCCTTTCCTGGGCCAGCGGTGGGAGACAACCATGCCCA
TGCTGCTGGAGTACCTGGATGAGCACACCGAGGAAAGCCTGTCACTGAAGGAGTGGGAAGAAAAGCTTCT
AATGTTCCTGCGAGACACCCTGGCCGTAGTATCTGACAACATCTGGATCTGCCAGCTGAGCCAAGAGATG
TGCAAGCAACTGCCCTCTTACAGTGGGACTCCTCAGGAGAAGAACTTCCTGTATAAGTGCATTGGAACCA
CGCTGGGTGCTGCTTCAAGTAAGGAGGTGGTGAGGAAACACCTCCGAGAGCTGCTGGAGACAGCCAGATA
TCAAGAGGAGGCAGAGCAGGAGGGCCTGGCCTGTTGCTTTGGGATCTGTGCCATTACCCACCTTGAGGAC
ACTCTAGCACAGCTGGAGGACTTTGTGAGGTCAGACGTGTTTAGGAAGTCCACCGGCATCTTTAGCATTT
TTAAGGATCGAAGCGAGCACGAAGTGGAAAGAATGAAGAGCTGTCTGATCCTGTGCTACGGGCACGTGGC
TGCCCAGGCCCCTCGGGAGCTGGTGCTGGCCAGGGTAGAGTCTGATATCCTGCGCAGCATGTTCCAGTGC
TTCAACACCAAGGACCCGGCCCTGAAGCTCTGCCTCGTCCAGAGCCTGTGCATGGTCAGCCAGGCCATGT
GCAGCAGCGCACAAGCCAGCTCCTTCCACTTCTTGAGGAAAACAGAGCTGGTGACACAGATGATGGAATT
CATCAGGGCAGAACCCCCAGACTGCCTGAGAACACCCATTCGGAAGAAAGCCATGTTGGCCTGCACATAC
CTGGTCAACTTGGAGCCCGCGCTGGAGGAGCAGACACAGGCAGATGTGGTCCACAGCTGCCTACACAGTG
TCATGGCCCTGCCACCTGAGGCTGAGGGGGGAGATGGCGTTGGCCGGGAGCCTCTGTATCTGGACACGGT
GTGTGCCCTTGAAGACTTGTTAACAAGACTGCTGCGGCAGAACATGACCCCCCAAGGCCTGCAGATCATG
GTAGAGCACCTGAGCCCGTGGATCAAGTCCCCGAGGGGTCATGAGCGGGCACGAGCACTTGGCTTGGGCG
CCTGCCTGCTGGAGTTCTTCCAGGAGCACTTGCTTGTCAGCACATTGGTACCCTTCCACAACCTGGGTCT
CCTGGTCGGTCTCTTTGCTCCACGGTGTGCGGACACATGGACTACCACCCGCCAGAAAGCCGTGGGCTGT
GTCTATTCCCTGCTCTACTTGCAGCTGGGCTATGAGGGCTTCTCCCGAGACCATCGTGATGATGTGGCCG
AGCGGCTCCTCACCCTGCAGGATGGCCTTGTGAACGCTGATCCCACCATCCTTTTCCACACTTGCCACAG
CATAGCCCAGGTCATCGCCAAGCGCCTCCCCTCAGACCAGCTCATCAGTCTCTTGCTCACGGTGTTTGAG
AGCCTGGGAGACCCAGACAAGAACTGCTCGCGCGCAGCCACAGTCATGATCAACTGCCTGCTGAAGGAGC
GGGGCAATGTGCTGCTGGAAAAGGTCCCAGGAGATTGCCAGCCATGGGACTTGAGGCTCTTATAG

Translation (1094 aa):
MTRPYIKRLSFTLLDSITDKDPMVQEQVCSALCSLGDAQPDETLHACEEYLRQHDKLAHPYRTKILRAME
TVLSSHIHDLDKDTAGAVILLATSEMTRTKELDCDWQQAAGSVLVAVGKRFTNQVMEEVLSRFQPGMLPH
SSVLHTLANLSVSNAFDMVPFLPSILSTMLPMLSMAKQDALKVVFCGALQHFSESILEYLANLDQAPDPT
VRKDTFGADIFGAYDVLFHHWLQSRDAKLRLAVVAALGPMSHLLPSERLEEQLPKLLPAVLGLYKKHAEA
FQISKSLGQILEAAVNVSSRTLEVQLDALLVALHAQICVPVESSSPLVMNSQKEVLRCFTVLACCSPDRL
LAFLLPRLDTSNERLRVGTLQILRHIINSAAAQMEAKQPFILSSMRLPLLDTNDKVKRAVVQVISAMAHH
GYLEQPGGEVMVEYIVQQCALPAEEPEKPGPDGEDLAADSVRAVSIRTLYLVSTTVDRMNSVLWPYLLEF
LTPVRFTAALTPLCRSLVHLALKRQEAGADDFLIQYNANANLPSPFAMTTRLLVVSSNPYLGDGRGAASL
RLLKVMHQNIHPFLGQRWETTMPMLLEYLDEHTEESLSLKEWEEKLLMFLRDTLAVVSDNIWICQLSQEM
CKQLPSYSGTPQEKNFLYKCIGTTLGAASSKEVVRKHLRELLETARYQEEAEQEGLACCFGICAITHLED
TLAQLEDFVRSDVFRKSTGIFSIFKDRSEHEVERMKSCLILCYGHVAAQAPRELVLARVESDILRSMFQC
FNTKDPALKLCLVQSLCMVSQAMCSSAQASSFHFLRKTELVTQMMEFIRAEPPDCLRTPIRKKAMLACTY
LVNLEPALEEQTQADVVHSCLHSVMALPPEAEGGDGVGREPLYLDTVCALEDLLTRLLRQNMTPQGLQIM
VEHLSPWIKSPRGHERARALGLGACLLEFFQEHLLVSTLVPFHNLGLLVGLFAPRCADTWTTTRQKAVGC
VYSLLYLQLGYEGFSRDHRDDVAERLLTLQDGLVNADPTILFHTCHSIAQVIAKRLPSDQLISLLLTVFE
SLGDPDKNCSRAATVMINCLLKERGNVLLEKVPGDCQPWDLRLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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