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Report for CCDS3921.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3921.1 Public Homo sapiens 5 NUP155 24 110 108 CCDS HistoryNCBI Gene:9631Re-query CCDS DB by CCDS ID:3921.1Re-query CCDS DB by GeneID:9631See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3921.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000231498.8 ENSP00000231498.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000231498.8Link to Ensembl Protein Viewer:ENSP00000231498.3Re-query CCDS DB by Nucleotide ID:ENST00000231498Re-query CCDS DB by Protein ID:ENSP00000231498
Original member Current member NCBI NM_153485.3 NP_705618.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153485.3Link to Protein Sequence:NP_705618.1Re-query CCDS DB by Nucleotide ID:NM_153485Re-query CCDS DB by Protein ID:NP_705618Link to BLAST:NP_705618.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705618.1 1391 O75694-1 1391 100% 0 0

Chromosomal Locations for CCDS 3921.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 37291900 37292038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37292879 37292985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37294329 37294465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37298868 37298978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37299448 37299568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37301437 37301550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37302779 37302908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37303260 37303414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37304739 37304843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37305057 37305210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37307297 37307432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37309129 37309267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37310552 37310743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37314198 37314328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37317988 37318085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37323992 37324107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37325901 37325967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37327629 37327776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37328358 37328420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37329190 37329278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37330038 37330132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37331685 37331795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37333463 37333633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37337818 37337918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37341090 37341242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37342549 37342646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37348505 37348596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37349172 37349245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37350160 37350265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37351190 37351356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37352737 37352829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37358081 37358151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37363888 37363984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37364247 37364384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37370821 37370977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4176 nt):
ATGCCGTCTTCTTTGTTGGGCGCGGCGATGCCGGCCTCTACATCTGCCGCAGCCCTGCAGGAAGCTCTGG
AAAATGCTGGACGGCTCATCGACCGTCAGTTGCAAGAGGACCGCATGTACCCGGACCTTTCCGAGCTGCT
TATGGTGTCTGCCCCAAATAATCCCACCGTTTCTGGCATGTCAGATATGGATTATCCTTTGCAAGGACCT
GGTTTGCTGTCCGTACCCAACCTTCCAGAGATCAGTTCCATCCGAAGAGTTCCTCTCCCACCTGAACTTG
TTGAGCAGTTTGGACATATGCAGTGTAATTGCATGATGGGTGTGTTCCCTCCTATCAGCAGAGCTTGGCT
CACAATTGACAGTGATATATTCATGTGGAACTATGAGGATGGAGGAGACCTTGCCTATTTTGATGGACTT
AGTGAGACTATTCTTGCTGTGGGGCTTGTGAAGCCAAAAGCAGGCATCTTTCAACCTCATGTGCGACACC
TCCTGGTTTTGGCGACCCCTGTAGACATAGTAATTCTTGGACTCAGCTATGCTAATTTGCAAACAGGTTC
TGGAGTTCTTAATGATAGTTTGTCTGGTGGAATGCAGTTGCTTCCAGATCCTTTATATTCTCTTCCTACT
GATAATACTTACCTTTTAACAATAACTTCCACTGATAATGGCAGAATTTTCTTGGCTGGAAAGGATGGCT
GTTTATATGAAGTAGCCTACCAGGCTGAAGCAGGGTGGTTTAGCCAAAGATGTAGGAAAATAAACCACTC
AAAGAGCTCACTTTCTTTCCTTGTTCCTTCCTTGCTACAATTCACGTTCTCAGAAGATGATCCTATTCTT
CAAATTGCAATTGATAATTCTAGAAATATTTTATATACACGATCTGAGAAAGGAGTAATACAGGTGTATG
ATTTGGGACAAGATGGACAAGGAATGAGCAGAGTTGCCTCTGTGTCACAGAATGCCATTGTCTCTGCTGC
TGGTAACATTGCTAGGACCATCGATCGTTCTGTTTTTAAACCAATTGTCCAAATAGCAGTGATTGAAAAT
TCTGAATCACTGGACTGTCAGTTATTGGCTGTCACACATGCAGGTGTTAGGTTATATTTTAGCACTTGTC
CATTCAGACAGCCATTAGCACGGCCTAATACACTGACGCTGGTTCATGTCCGCTTACCTCCTGGATTCTC
AGCATCTTCAACCGTGGAAAAGCCTTCAAAAGTACATAGAGCTCTTTATAGTAAAGGTATTCTATTGATG
GCAGCCTCAGAAAATGAGGATAATGATATTTTATGGTGTGTCAACCATGATACTTTTCCTTTCCAAAAGC
CAATGATGGAAACCCAGATGACAGCTGGTGTTGATGGTCATTCCTGGGCTCTTTCTGCGATAGATGAATT
GAAAGTAGATAAAATAATTACACCTTTAAACAAGGATCATATTCCAATAACTGATTCACCAGTTGTTGTA
CAGCAGCACATGTTACCTCCGAAGAAATTTGTTCTCCTCTCAGCACAGGGGAGCCTTATGTTTCATAAAC
TTAGACCTGTAGATCAACTGAGGCATCTACTTGTGAGTAATGTGGGAGGAGATGGAGAAGAGATTGAAAG
ATTCTTTAAATTACATCAGGAAGACCAGGCTTGTGCAACTTGCCTTATTCTTGCTTGCTCCACTGCTGCC
TGTGATAGAGAAGTATCTGCCTGGGCTACTCGGGCTTTCTTTAGGTATGGTGGTGAAGCACAGATGAGAT
TTCCAACCACTCTTCCGCCTCCAAGTAATGTTGGTCCCATCTTGGGGTCTCCTGTCTATTCTAGTTCTCC
TGTTCCTAGTGGTAGTCCCTATCCAAATCCATCCTTTTTGGGAACACCGTCTCATGGTATACAGCCTCCT
GCCATGTCAACTCCAGTGTGTGCTCTGGGAAACCCAGCAACTCAGGCCACAAATATGAGTTGTGTGACTG
GACCAGAGATTGTGTACTCTGGAAAACACAATGGTATTTGCATTTACTTTTCTCGGATCATGGGAAACAT
TTGGGATGCAAGCTTAGTTGTGGAGAGAATATTCAAGAGTGGCAACAGAGAGATCACTGCAATTGAAAGT
AGTGTTCCCTGCCAACTGCTAGAGTCAGTGCTACAAGAACTAAAGGGTTTGCAGGAATTTCTAGACAGAA
ACTCCCAGTTTGCAGGAGGACCATTAGGAAATCCAAATACTACTGCTAAAGTGCAGCAGAGGCTGATAGG
ATTCATGCGTCCTGAAAACGGAAATCCCCAGCAAATGCAACAGGAACTGCAGAGGAAGTTTCATGAGGCT
CAACTAAGTGAAAAGATTTCACTTCAGGCAATTCAGCAGTTGGTTCGAAAATCATATCAGGCTCTGGCTT
TATGGAAACTTCTTTGTGAACATCAATTCACTATCATTGTGGCAGAACTTCAGAAGGAACTTCAAGAGCA
GCTGAAGATCACCACCTTTAAAGATCTTGTAATCAGGGACAAAGAACTCACAGGGGCATTAATTGCTTCT
CTTATCAACTGCTACATCAGAGATAATGCCGCTGTTGATGGCATTAGTTTACATTTACAGGATATCTGCC
CACTTCTATATAGCACTGATGATGCAATTTGTTCTAAGGCAAATGAGCTTCTCCAGCGTTCCCGACAAGT
TCAAAATAAGACTGAAAAAGAAAGAATGTTAAGGGAATCATTAAAGGAATATCAAAAAATTAGCAATCAA
GTGGACCTTTCCAATGTTTGTGCTCAGTATAGACAAGTGAGATTTTATGAGGGTGTGGTGGAACTTTCTC
TTACGGCTGCAGAGAAAAAAGATCCTCAAGGTCTTGGGCTTCATTTCTATAAACATGGAGAACCAGAAGA
AGACATAGTTGGACTTCAGGCCTTCCAAGAAAGATTAAACAGTTACAAATGCATTACAGACACACTTCAA
GAACTGGTAAATCAAAGTAAGGCCGCTCCTCAGTCTCCCAGTGTACCCAAAAAACCTGGTCCTCCAGTGT
TGTCATCTGATCCAAATATGCTGAGTAATGAAGAAGCAGGACATCATTTTGAACAAATGCTTAAATTGTC
ACAGCGATCCAAGGATGAGCTCTTTAGTATTGCCCTTTATAATTGGCTAATACAAGTCGACCTTGCAGAT
AAGCTGCTACAGGTTGCTTCTCCATTTCTGGAGCCACATCTAGTCCGAATGGCCAAAGTTGATCAAAACA
GAGTTCGTTATATGGATTTACTCTGGCGGTATTACGAGAAGAACAGAAGTTTCAGTAATGCTGCTCGTGT
ACTGTCCAGACTGGCTGACATGCATAGCACAGAAATTTCACTTCAGCAGCGACTAGAGTACATTGCTCGA
GCCATTCTTAGTGCCAAAAGTTCCACTGCCATTTCATCAATAGCTGCCGATGGTGAATTTCTTCATGAAT
TAGAAGAAAAAATGGAGGTTGCTAGGATCCAACTTCAGATACAGGAGACACTACAAAGGCAGTATTCCCA
TCATTCTTCTGTACAGGATGCAGTTTCTCAGCTGGATTCTGAGCTGATGGACATAACTAAGCTTTATGGG
GAATTTGCTGACCCATTTAAACTTGCAGAGTGCAAACTTGCAATAATTCATTGTGCCGGTTATTCAGACC
CTATATTGGTGCAGACACTTTGGCAAGATATCATAGAGAAAGAATTGAGTGACAGTGTGACATTGAGCTC
CTCGGATAGAATGCATGCTCTTAGTCTCAAGATTGTTCTCCTTGGCAAAATTTATGCTGGCACACCACGC
TTCTTTCCTTTAGATTTTATTGTACAGTTTTTAGAACAGCAGGTTTGTACTTTGAACTGGGATGTGGGCT
TCGTAATACAGACAATGAATGAAATTGGAGTACCATTACCTAGACTACTAGAAGTTTATGATCAGTTGTT
CAAATCACGGGATCCATTCTGGAACAGAATGAAGAAGCCACTGCACCTTTTGGATTGTATACATGTATTA
TTGATAAGATATGTTGAGAATCCCAGCCAAGTTTTAAATTGTGAAAGGAGAAGATTTACAAATCTCTGCC
TGGATGCTGTTTGTGGTTACCTTGTTGAGCTCCAGTCTATGAGCTCGTCAGTAGCAGTACAAGCCATCAC
TGGGAATTTTAAATCTCTTCAAGCTAAATTAGAACGGCTTCATTAA

Translation (1391 aa):
MPSSLLGAAMPASTSAAALQEALENAGRLIDRQLQEDRMYPDLSELLMVSAPNNPTVSGMSDMDYPLQGP
GLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGL
SETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQLLPDPLYSLPT
DNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIL
QIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIEN
SESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILLM
AASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVV
QQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAA
CDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPP
AMSTPVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIES
SVPCQLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEA
QLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIAS
LINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQ
VDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQ
ELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLAD
KLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIAR
AILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYG
EFADPFKLAECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTPR
FFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKKPLHLLDCIHVL
LIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGNFKSLQAKLERLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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