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Report for CCDS2816.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2816.1 Public Homo sapiens 3 HYAL1 24 110 108 CCDS HistoryNCBI Gene:3373Re-query CCDS DB by CCDS ID:2816.1Re-query CCDS DB by GeneID:3373See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2816.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266031.8 ENSP00000266031.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000266031.8Link to Ensembl Protein Viewer:ENSP00000266031.4Re-query CCDS DB by Nucleotide ID:ENST00000266031Re-query CCDS DB by Protein ID:ENSP00000266031
Original member Current member EBI ENST00000320295.12 ENSP00000346068.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320295.12Link to Ensembl Protein Viewer:ENSP00000346068.5Re-query CCDS DB by Nucleotide ID:ENST00000320295Re-query CCDS DB by Protein ID:ENSP00000346068
Original member Current member EBI ENST00000395144.7 ENSP00000378576.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395144.7Link to Ensembl Protein Viewer:ENSP00000378576.2Re-query CCDS DB by Nucleotide ID:ENST00000395144Re-query CCDS DB by Protein ID:ENSP00000378576
Original member Current member EBI ENST00000618175.4 ENSP00000477903.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618175.4Link to Ensembl Protein Viewer:ENSP00000477903.1Re-query CCDS DB by Nucleotide ID:ENST00000618175Re-query CCDS DB by Protein ID:ENSP00000477903
Original member Current member NCBI NM_033159.4 NP_149349.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033159.4Link to Protein Sequence:NP_149349.2Re-query CCDS DB by Nucleotide ID:NM_033159Re-query CCDS DB by Protein ID:NP_149349Link to BLAST:NP_149349.2
Original member Current member NCBI NM_153281.2 NP_695013.1 Accepted alive Link to Nucleotide Sequence:NM_153281.2Link to Protein Sequence:NP_695013.1Re-query CCDS DB by Nucleotide ID:NM_153281Re-query CCDS DB by Protein ID:NP_695013Link to BLAST:NP_695013.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149349.2 435 Q12794-1 435 100% 0 0
NP_695013.1 435 Q12794-1 435 100% 0 0

Chromosomal Locations for CCDS 2816.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 50300483 50300800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50300988 50301077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50302057 50302956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1308 nt):
ATGGCAGCCCACCTGCTTCCCATCTGCGCCCTCTTCCTGACCTTACTCGATATGGCCCAAGGCTTTAGGG
GCCCCTTGCTACCCAACCGGCCCTTCACCACCGTCTGGAATGCAAACACCCAGTGGTGCCTGGAGAGGCA
CGGTGTGGACGTGGATGTCAGTGTCTTCGATGTGGTAGCCAACCCAGGGCAGACCTTCCGCGGCCCTGAC
ATGACAATTTTCTATAGCTCCCAGCTGGGCACCTACCCCTACTACACGCCCACTGGGGAGCCTGTGTTTG
GTGGTCTGCCCCAGAATGCCAGCCTGATTGCCCACCTGGCCCGCACATTCCAGGACATCCTGGCTGCCAT
ACCTGCTCCTGACTTCTCAGGGCTGGCAGTCATCGACTGGGAGGCATGGCGCCCACGCTGGGCCTTCAAC
TGGGACACCAAGGACATTTACCGGCAGCGCTCACGGGCACTGGTACAGGCACAGCACCCTGATTGGCCAG
CTCCTCAGGTGGAGGCAGTAGCCCAGGACCAGTTCCAGGGAGCTGCACGGGCCTGGATGGCAGGCACCCT
CCAGCTGGGGCGGGCACTGCGTCCTCGCGGCCTCTGGGGCTTCTATGGCTTCCCTGACTGCTACAACTAT
GACTTTCTAAGCCCCAACTACACCGGCCAGTGCCCATCAGGCATCCGTGCCCAAAATGACCAGCTAGGGT
GGCTGTGGGGCCAGAGCCGTGCCCTCTATCCCAGCATCTACATGCCCGCAGTGCTGGAGGGCACAGGGAA
GTCACAGATGTATGTGCAACACCGTGTGGCCGAGGCATTCCGTGTGGCTGTGGCTGCTGGTGACCCCAAT
CTGCCGGTGCTGCCCTATGTCCAGATCTTCTATGACACGACAAACCACTTTCTGCCCCTGGATGAGCTGG
AGCACAGCCTGGGGGAGAGTGCGGCCCAGGGGGCAGCTGGAGTGGTGCTCTGGGTGAGCTGGGAAAATAC
AAGAACCAAGGAATCATGTCAGGCCATCAAGGAGTATATGGACACTACACTGGGGCCCTTCATCCTGAAC
GTGACCAGTGGGGCCCTTCTCTGCAGTCAAGCCCTGTGCTCCGGCCATGGCCGCTGTGTCCGCCGCACCA
GCCACCCCAAAGCCCTCCTCCTCCTTAACCCTGCCAGTTTCTCCATCCAGCTCACGCCTGGTGGTGGGCC
CCTGAGCCTGCGGGGTGCCCTCTCACTTGAAGATCAGGCACAGATGGCTGTGGAGTTCAAATGTCGATGC
TACCCTGGCTGGCAGGCACCGTGGTGTGAGCGGAAGAGCATGTGGTGA

Translation (435 aa):
MAAHLLPICALFLTLLDMAQGFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVANPGQTFRGPD
MTIFYSSQLGTYPYYTPTGEPVFGGLPQNASLIAHLARTFQDILAAIPAPDFSGLAVIDWEAWRPRWAFN
WDTKDIYRQRSRALVQAQHPDWPAPQVEAVAQDQFQGAARAWMAGTLQLGRALRPRGLWGFYGFPDCYNY
DFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPN
LPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILN
VTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRC
YPGWQAPWCERKSMW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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