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Report for CCDS31631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31631.1 Public Homo sapiens 11 DEFB108B 24 110 108 CCDS HistoryNCBI Gene:245911Re-query CCDS DB by CCDS ID:31631.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31631.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328698.2 ENSP00000333234.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328698.2Link to Ensembl Protein Viewer:ENSP00000333234.1Re-query CCDS DB by Nucleotide ID:ENST00000328698Re-query CCDS DB by Protein ID:ENSP00000333234
Original member Current member NCBI NM_001002035.2 NP_001002035.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002035.2Link to Protein Sequence:NP_001002035.1Re-query CCDS DB by Nucleotide ID:NM_001002035Re-query CCDS DB by Protein ID:NP_001002035Link to BLAST:NP_001002035.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002035.1 73 Q8NET1 73 100% 0 0

Chromosomal Locations for CCDS 31631.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 71833200 71833257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 71837399 71837562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (222 nt):
ATGAGGATTGCTGTCCTCCTCTTCGCCATTTTCTTCTTTATGAGCCAAGTTCTACCAGCCAGGGGCAAAT
TCAAGGAGATCTGTGAACGTCCAAATGGCTCCTGTCGGGACTTTTGCCTTGAAACAGAAATCCATGTTGG
GAGATGTTTAAATAGCCAACCCTGCTGCCTGCCTCTGGGGCATCAACCAAGAATTGAGAGCACTACACCC
AAAAAGGACTGA

Translation (73 aa):
MRIAVLLFAIFFFMSQVLPARGKFKEICERPNGSCRDFCLETEIHVGRCLNSQPCCLPLGHQPRIESTTP
KKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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