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Report for CCDS736.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
736.1 Public Homo sapiens 1 EPHX4 24 110 108 CCDS HistoryNCBI Gene:253152Re-query CCDS DB by CCDS ID:736.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 736.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370383.5 ENSP00000359410.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370383.5Link to Ensembl Protein Viewer:ENSP00000359410.4Re-query CCDS DB by Nucleotide ID:ENST00000370383Re-query CCDS DB by Protein ID:ENSP00000359410
Original member Current member NCBI NM_173567.5 NP_775838.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173567.5Link to Protein Sequence:NP_775838.3Re-query CCDS DB by Nucleotide ID:NM_173567Re-query CCDS DB by Protein ID:NP_775838Link to BLAST:NP_775838.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775838.3 362 Q8IUS5 362 100% 0 0

Chromosomal Locations for CCDS 736.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92030080 92030310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92032505 92032590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92042823 92042980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92045532 92045660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92050317 92050420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92052510 92052658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92063055 92063286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGCGAGGCTGCGGGATTGCCTGCCCCGCCTGATGCTCACGCTCCGGTCCCTGCTCTTCTGGTCCCTGG
TCTACTGCTACTGCGGGCTCTGCGCCTCCATCCACCTGCTCAAACTTTTGTGGAGCCTCGGCAAGGGGCC
GGCGCAGACCTTCCGGCGGCCCGCCCGGGAGCACCCTCCCGCGTGCCTGAGCGACCCCTCCTTGGGCACC
CACTGCTACGTGCGGATCAAGGATTCAGGGTTAAGATTTCACTATGTTGCTGCTGGAGAAAGAGGCAAAC
CACTTATGCTGCTGCTTCATGGATTTCCAGAATTCTGGTATTCTTGGCGTTACCAACTGAGAGAATTTAA
AAGTGAATATCGAGTTGTAGCACTGGATTTGAGAGGTTATGGAGAAACAGATGCTCCCATTCATCGACAG
AATTATAAATTGGATTGTCTAATTACAGATATAAAGGATATTTTAGATTCTTTAGGGTATAGCAAATGTG
TTCTTATTGGCCATGACTGGGGGGGCATGATTGCTTGGCTAATTGCCATCTGTTATCCTGAAATGGTGAT
GAAGCTTATTGTTATTAACTTCCCTCATCCAAATGTATTTACAGAATATATTTTACGACACCCTGCTCAG
CTGTTGAAATCCAGTTATTATTACTTCTTCCAAATACCATGGTTCCCAGAATTTATGTTCTCAATAAATG
ATTTCAAGGTTTTGAAACATCTGTTTACCAGTCACAGCACTGGCATTGGAAGAAAAGGATGCCAATTAAC
AACAGAGGATCTTGAAGCTTATATTTATGTCTTTTCTCAGCCTGGAGCATTAAGTGGCCCAATTAACCAT
TACCGAAATATCTTCAGCTGCCTGCCTCTCAAACATCACATGGTGACCACTCCAACACTACTACTGTGGG
GAGAGAATGACGCATTCATGGAGGTTGAGATGGCTGAAGTCACAAAGATTTATGTTAAAAACTATTTCAG
GCTAACTATTTTGTCAGAAGCCAGTCATTGGCTTCAGCAAGACCAACCTGACATAGTGAACAAATTGATA
TGGACATTTCTAAAAGAAGAAACAAGAAAAAAAGATTGA

Translation (362 aa):
MARLRDCLPRLMLTLRSLLFWSLVYCYCGLCASIHLLKLLWSLGKGPAQTFRRPAREHPPACLSDPSLGT
HCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSEYRVVALDLRGYGETDAPIHRQ
NYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFPHPNVFTEYILRHPAQ
LLKSSYYYFFQIPWFPEFMFSINDFKVLKHLFTSHSTGIGRKGCQLTTEDLEAYIYVFSQPGALSGPINH
YRNIFSCLPLKHHMVTTPTLLLWGENDAFMEVEMAEVTKIYVKNYFRLTILSEASHWLQQDQPDIVNKLI
WTFLKEETRKKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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