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Report for CCDS46131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46131.1 Public Homo sapiens 19 INAFM1 24 110 108 CCDS HistoryNCBI Gene:255783Re-query CCDS DB by CCDS ID:46131.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 46131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000552360.4 ENSP00000447679.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000552360.4Link to Ensembl Protein Viewer:ENSP00000447679.1Re-query CCDS DB by Nucleotide ID:ENST00000552360Re-query CCDS DB by Protein ID:ENSP00000447679
Original member Current member NCBI NM_178511.6 NP_848606.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178511.6Link to Protein Sequence:NP_848606.3Re-query CCDS DB by Nucleotide ID:NM_178511Re-query CCDS DB by Protein ID:NP_848606Link to BLAST:NP_848606.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848606.3 142 C9JVW0 142 100% 0 0

Chromosomal Locations for CCDS 46131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 47274920 47275348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGCGGGGGACCAGCTGCGTGGGCGGCGGCGCCGAGAGCCCCGGAGGCGCGGGGCTGAGCGAGGGCCCGC
GGGGGCGCTGGCTGCGCTTGGCTCCGGTATGCGCCTACTTCCTCTGCGTCTCGCTAGCTGCCGTGCTGCT
CGCCGTGTACTACGGTCTCATCTGGGTACCCACGCGGTCTCCCGCGGCACCCGCCGGCCCACAGCCCAGC
GCGCCGTCCCCTCCGTGTGCTGCCCGCCCGGGCGTGCCGCCTGTCCCGGCGCCCGCCGCTGCCTCCCTCT
CCTGCCTCCTGGGAGTCCCCGGCGGGCCGCGACCCCAGCTCCAGCTGCCGCTGAGCCGCCGCCGCCGCTA
CAGCGACCCTGACCGCCGTCCGAGCCGCCAGACACCCAGAGAGACGCCAGAGGCCGCGGAGGGGCGAAGA
CCCGGGTAA

Translation (142 aa):
MRGTSCVGGGAESPGGAGLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTRSPAAPAGPQPS
APSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDPDRRPSRQTPRETPEAAEGRR
PG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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