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Report for CCDS13848.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13848.1 Public Homo sapiens 22 C22orf31 24 110 108 CCDS HistoryNCBI Gene:25770Re-query CCDS DB by CCDS ID:13848.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13848.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216071.5 ENSP00000216071.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216071.5Link to Ensembl Protein Viewer:ENSP00000216071.4Re-query CCDS DB by Nucleotide ID:ENST00000216071Re-query CCDS DB by Protein ID:ENSP00000216071
Original member Current member NCBI NM_015370.2 NP_056185.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015370.2Link to Protein Sequence:NP_056185.1Re-query CCDS DB by Nucleotide ID:NM_015370Re-query CCDS DB by Protein ID:NP_056185Link to BLAST:NP_056185.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056185.1 290 O95567 290 100% 0 0

Chromosomal Locations for CCDS 13848.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 29058742 29059182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29060415 29060843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29061790 29061792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (873 nt):
ATGCACCCAATCAATGTGAGACGAGACCCCAGCATCCCTATCTATGGACTCCGACAGTCCATCTTATTAA
ATACCAGGCTTCAGGACTGCTATGTGGACTCACCGGCTCTCACCAACATCTGGATGGCCAGAACATGTGC
AAAGCAGAACATTAATGCCCCAGCACCAGCTACCACTTCCTCTTGGGAAGTTGTAAGGAACCCATTAATT
GCCAGTTCCTTCTCCCTGGTTAAGCTTGTACTCAGGCGGCAACTGAAGAATAAGTGCTGCCCACCACCAT
GCAAGTTTGGAGAAGGAAAACTCTCGAAGAGATTAAAGCACAAGGACGATTCAGTGATGAAAGCCACCCA
GCAGGCCAGGAAAAGAAACTTCATCAGTTCCAAGAGCAAGCAGCCAGCAGGGCATAGGAGGCCTGCAGGA
GGCATCAGAGAGAGTAAAGAAAGTTCAAAGGAGAAAAAACTAACAGTCCGCCAAGATCTTGAGGACAGAT
ATGCTGAACATGTGGCTGCCACCCAAGCGCTACCCCAGGACAGTGGGACAGCAGCCTGGAAGGGCCGAGT
GTTGCTTCCTGAAACCCAAAAGAGACAGCAGTTGTCGGAGGACACGCTAACCATCCATGGTCTCCCCACA
GAGGGTTACCAGGCTCTGTACCACGCTGTGGTGGAGCCAATGCTGTGGAATCCTTCAGGGACCCCCAAGA
GGTACAGCCTGGAGCTGGGCAAGGCCATTAAACAAAAGCTCTGGGAGGCTCTTTGCAGTCAGGGTGCCAT
CTCTGAAGGTGCTCAGAGGGACCGGTTCCCTGGCAGGAAGCAGCCAGGTGTCCACGAGGAGCCTGTACTC
AAGAAATGGCCCAAGTTAAAGAGCAAAAAATAG

Translation (290 aa):
MHPINVRRDPSIPIYGLRQSILLNTRLQDCYVDSPALTNIWMARTCAKQNINAPAPATTSSWEVVRNPLI
ASSFSLVKLVLRRQLKNKCCPPPCKFGEGKLSKRLKHKDDSVMKATQQARKRNFISSKSKQPAGHRRPAG
GIRESKESSKEKKLTVRQDLEDRYAEHVAATQALPQDSGTAAWKGRVLLPETQKRQQLSEDTLTIHGLPT
EGYQALYHAVVEPMLWNPSGTPKRYSLELGKAIKQKLWEALCSQGAISEGAQRDRFPGRKQPGVHEEPVL
KKWPKLKSKK


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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