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Report for CCDS6615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6615.1 Public Homo sapiens 9 ALDH1B1 24 110 108 CCDS HistoryNCBI Gene:219Re-query CCDS DB by CCDS ID:6615.1Re-query CCDS DB by GeneID:219See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6615.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377698.4 ENSP00000366927.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377698.4Link to Ensembl Protein Viewer:ENSP00000366927.3Re-query CCDS DB by Nucleotide ID:ENST00000377698Re-query CCDS DB by Protein ID:ENSP00000366927
Original member Current member NCBI NM_000692.5 NP_000683.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000692.5Link to Protein Sequence:NP_000683.3Re-query CCDS DB by Nucleotide ID:NM_000692Re-query CCDS DB by Protein ID:NP_000683Link to BLAST:NP_000683.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000683.3 517 P30837 517 100% 0 0

Chromosomal Locations for CCDS 6615.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38395749 38397302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGCTGCGCTTCCTGGCACCCCGGCTGCTTAGCCTCCAGGGCAGGACCGCCCGCTACTCCTCGGCAGCAG
CCCTCCCAAGCCCCATTCTGAACCCAGACATCCCCTACAACCAGCTGTTCATCAACAATGAATGGCAAGA
TGCAGTCAGCAAGAAGACCTTCCCGACGGTCAACCCTACCACCGGGGAGGTCATTGGGCACGTGGCTGAA
GGTGACCGGGCTGATGTGGATCGGGCCGTGAAAGCAGCCCGGGAAGCCTTCCGCCTGGGGTCCCCATGGC
GCCGGATGGATGCCTCTGAGCGGGGCCGGCTGCTGAACCGCCTGGCAGACCTAGTGGAGCGGGATCGAGT
CTACTTGGCCTCACTCGAGACCTTGGACAATGGGAAGCCTTTCCAAGAGTCTTACGCCTTGGACTTGGAT
GAGGTCATCAAGGTGTATCGGTACTTTGCTGGCTGGGCTGACAAGTGGCATGGCAAGACCATCCCCATGG
ATGGCCAGCATTTCTGCTTCACCCGGCATGAGCCCGTTGGTGTCTGTGGCCAGATCATCCCGTGGAACTT
CCCCTTGGTCATGCAGGGTTGGAAACTTGCCCCGGCACTCGCCACAGGCAACACTGTGGTTATGAAGGTG
GCAGAGCAGACCCCCCTCTCTGCCCTGTATTTGGCCTCCCTCATCAAGGAGGCAGGCTTTCCCCCTGGGG
TGGTGAACATCATCACGGGGTATGGCCCAACAGCAGGTGCGGCCATCGCCCAGCACGTGGATGTTGACAA
AGTTGCCTTCACCGGTTCCACCGAGGTGGGCCACCTGATCCAGAAAGCAGCTGGCGATTCCAACCTCAAG
AGAGTCACCCTGGAGCTGGGTGGTAAGAGCCCCAGCATCGTGCTGGCCGATGCTGACATGGAGCATGCCG
TGGAGCAGTGCCACGAAGCCCTGTTCTTCAACATGGGCCAGTGCTGCTGTGCTGGCTCCCGGACCTTCGT
GGAAGAATCCATCTACAATGAGTTTCTCGAGAGAACCGTGGAGAAAGCAAAGCAGAGGAAAGTGGGGAAC
CCCTTTGAGCTGGACACCCAGCAGGGGCCTCAGGTGGACAAGGAGCAGTTTGAACGAGTCCTAGGCTACA
TCCAGCTTGGCCAGAAGGAGGGCGCAAAACTCCTCTGTGGCGGAGAGCGTTTCGGGGAGCGTGGTTTCTT
CATCAAGCCTACTGTCTTTGGTGGCGTGCAGGATGACATGAGAATTGCCAAAGAGGAGATCTTTGGGCCT
GTGCAGCCCCTGTTCAAGTTCAAGAAGATTGAGGAGGTGGTTGAGAGGGCCAACAACACCAGGTATGGCC
TGGCTGCGGCTGTGTTCACCCGGGATCTGGACAAGGCCATGTACTTCACCCAGGCACTCCAGGCCGGGAC
CGTGTGGGTAAACACCTACAACATCGTCACCTGCCACACGCCATTTGGAGGGTTTAAGGAATCTGGAAAC
GGGAGGGAGCTGGGTGAGGATGGGCTTAAGGCCTACACAGAGGTAAAGACGGTCACCATCAAGGTTCCTC
AGAAGAACTCGTAA

Translation (517 aa):
MLRFLAPRLLSLQGRTARYSSAAALPSPILNPDIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAE
GDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYALDLD
EVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKV
AEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHVDVDKVAFTGSTEVGHLIQKAAGDSNLK
RVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGN
PFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGP
VQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGN
GRELGEDGLKAYTEVKTVTIKVPQKNS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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