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Report for CCDS16355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16355.1 Public Mus musculus 2 Or4c29 23 108 98 CCDS HistoryNCBI Gene:258453Re-query CCDS DB by CCDS ID:16355.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16355.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099809.1 ENSMUSP00000097397.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099809.1Link to Ensembl Protein Viewer:ENSMUSP00000097397.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000099809Re-query CCDS DB by Protein ID:ENSMUSP00000097397
Original member Current member EBI ENSMUST00000213136.1 ENSMUSP00000150607.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213136.1Link to Ensembl Protein Viewer:ENSMUSP00000150607.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213136Re-query CCDS DB by Protein ID:ENSMUSP00000150607
Original member Current member NCBI NM_146461.2 NP_666672.2 Accepted alive Link to Nucleotide Sequence:NM_146461.2Link to Protein Sequence:NP_666672.2Re-query CCDS DB by Nucleotide ID:NM_146461Re-query CCDS DB by Protein ID:NP_666672Link to BLAST:NP_666672.2

Chromosomal Locations for CCDS 16355.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 88909459 88910391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGTGGCTGAATAACAATGTGACTGAATTCATTTTACTTGGTTTGACACAGGATCCTTTTAGGAAGAAAA
TCCTATTTGTTGTGTTTTTGCTTTTTTACATGGGGACATTACTGGGTAACTTGCTTATCATTGCTACAAT
CAAGACAAGCCAGACCCTTGGGAGTCCCATGTACTTCTTCCTGTTCTACTTATCCTTGTCTGACACCTGC
TTCTCTACAACCATAGCTCCAAGAACAATTGTGGACTCTTTGCTTAAGGAAGCCTCTATATCTTTCACTG
AGTGCATAATCCAAGTCTTTACATTTCATTTCTTTGGCTGTCTGGAGATCTTTATCCTTATCCTCATGGC
TGTGGACCGATATGTGGCCATCTGTAAGCCCCTGCACTACATGACCATCATGAGCCGCCGGGTCTGTGGG
GTGTTGGTGGCCATAGCCTGGGTGGGATCCTGTGTTCATTCTTTAGTTCAGATATTTCTGGCCTTGAGTT
TGCCCTTCTGTGGCCCCAATGAAATTGATCACTATTTCTGTGACTTGCAGCCACTATTGAAGCTTGCCTG
TTCAGACACATATTTGATCAACCTGCTTCTGGTGTCCAACAGTGGAGCCATTTGTACAGTGAGTTTCCTC
ATGCTGATGGTCTCTTATGTCATTATTCTTCGTTCTCTAAGAAACCACAGTGCTGAAGGGAGGAGGAAAG
CCCTATCTACCTGCATATCCCACATTATTGTGGTCATCCTGTTCTTTGGACCTTGCATCTTTATATACAC
ACGCCCTGCAACAACATTTCCTATGGACAAGATGATAGCTATATTTTATTCAATTGGTACACCTTTGCTC
AATCCTCTGATTTACACACTGAGGAATGCAGAGGTGAAAAATGCCATGAAGAAGTTATGGAGAAAGAAAG
TGGTCTCAGATGATCGAAAGTAA

Translation (310 aa):
MWLNNNVTEFILLGLTQDPFRKKILFVVFLLFYMGTLLGNLLIIATIKTSQTLGSPMYFFLFYLSLSDTC
FSTTIAPRTIVDSLLKEASISFTECIIQVFTFHFFGCLEIFILILMAVDRYVAICKPLHYMTIMSRRVCG
VLVAIAWVGSCVHSLVQIFLALSLPFCGPNEIDHYFCDLQPLLKLACSDTYLINLLLVSNSGAICTVSFL
MLMVSYVIILRSLRNHSAEGRRKALSTCISHIIVVILFFGPCIFIYTRPATTFPMDKMIAIFYSIGTPLL
NPLIYTLRNAEVKNAMKKLWRKKVVSDDRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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