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Report for CCDS7495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7495.1 Public Homo sapiens 10 SEC31B 24 110 108 CCDS HistoryNCBI Gene:25956Re-query CCDS DB by CCDS ID:7495.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7495.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370345.8 ENSP00000359370.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370345.8Link to Ensembl Protein Viewer:ENSP00000359370.3Re-query CCDS DB by Nucleotide ID:ENST00000370345Re-query CCDS DB by Protein ID:ENSP00000359370
Original member Current member NCBI NM_015490.4 NP_056305.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015490.4Link to Protein Sequence:NP_056305.1Re-query CCDS DB by Nucleotide ID:NM_015490Re-query CCDS DB by Protein ID:NP_056305Link to BLAST:NP_056305.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056305.1 1179 Q9NQW1-1 1179 100% 0 0

Chromosomal Locations for CCDS 7495.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 100487616 100487795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100488027 100488098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100488858 100488974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100489252 100489398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100489703 100489761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100490008 100490322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100490706 100490883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100495385 100495546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100496258 100496431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100497135 100497280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100497667 100497793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100498029 100498207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100498705 100498804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100499160 100499258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100499524 100499598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100502254 100502484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100505361 100505495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100506040 100506201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100506321 100506420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100507425 100507567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100507908 100508051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100509007 100509102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100509316 100509511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100516096 100516219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100516874 100516952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3540 nt):
ATGAAGCTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCTTTGTATC
TGGCCACAGGAACATCTGCCCAACAGCTAGATTCCTCCTTCAGCACAAATGGCACATTGGAAATATTTGA
GGTTGATTTCAGGGACCCTTCTCTGGACTTGAAACACAGAGGAGTCCTTTCTGCCTTGAGCAGGTTTCAC
AAGCTGGTCTGGGGGAGCTTTGGCAGTGGGCTTCTGGAAAGCTCCGGGGTTATTGTTGGCGGCGGGGACA
ATGGCATGCTTATTCTATACAATGTGACCCACATCCTGTCTTCGGGGAAGGAGCCTGTGATTGCTCAGAA
ACAGAAGCACACGGGGGCTGTCAGAGCCCTCGACTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAGGG
GCCAGCGATTCTGAAATCTTCATTTGGGATCTGAATAACTTGAATGTGCCAATGACCCTGGGATCCAAGT
CACAGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGC
TCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTCAGGAAGAATGAACCTATCATCAAAGTCAGTGATCAC
AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAG
AGGATGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGA
GAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCT
AAGGACAGCCAGATCTTGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATAAGCTACCAACACAGAGCA
GCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCCTCCTTCAACGGCTG
GATCAGTTTGTACTCTGTGATGGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGCTGACAAGATCTCC
TCTTCCTTCAGCAAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACCACTGA
TACCTCCCCTGAAAAAACCCCCCAAATGGATTAGAAGACCAACAGGTGTTTCATTTGCTTTTGGAGGGAA
GCTGGTTACTTTTGGCCTCCCCAGCACCCCTGCCCATCTGGTGCCACAGCCTTGCCCCCGCCTAGTCTTC
ATCAGTCAAGTCACCACAGAATCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATCAG
GAAATCTACTGAATTACTGTCAGAACAAGAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCA
GTTCCTGAAGGTGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAAAGCTTTTAGGATACAGTAAAGAT
GAGCTTCAGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGG
GAAATGACCTCAACAGTGACAGACAACAGGCCTTCTGCAGCCAGGCCTCCAAACACACCACAAAGGAAGC
CTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTTGGGAGATCCCCATCACA
AAAGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGAGCTGTGTC
TGAAGGAGGAGCGCTTTGCTGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGATCTGCTGAAGCAAAC
ACAGGAGCGCTACTTGGCCAAGAAGAAAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAAT
TGGAAGGATGTGGTGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACT
CAGGCACAGAGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGC
ACTAACCTCCGAAGCCAGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGGCTGGTGGAGTGCTGGGCA
AAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAGAAGGTGATGGTTCTTAACAGGA
GCTTGGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACCTACAGGGTCACTCAGTA
TGCCAACCTCCTGGCAGCCCAGGGCAGCCTGGCCACTGCCATGAGCTTTCTACCCAGGGACTGTGCTCAG
CCACCAGTTCAGCAGCTAAGAGATCGGCTTTTTCATGCTCAAGGTTCTGCTGTCTTGGGCCAACAGTCTC
CCCCTTTCCCCTTCCCCCGGATTGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATCATCTTACAGATT
GGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCA
CCAGCGATGCCCTTGGCACCTTCCCATCCTAGCCCTTATCAGGGTCCCAGGACACAGAATATAAGTGACT
ACAGGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTTTGAGCCCTGGGGTAAGGCCTGCTTCATCTCA
GCCACAGCTATTAGGAGGGCAAAGGGTGCAAGTTCCTAACCCGGTGGGATTCCCTGGGACATGGCCTCTT
CCTGGTTCCCCTCTACCCATGGCATGCCCAGGCATCATGCGACCTGGCTCTACCTCCCTGCCTGAGACTC
CTAGACTGTTCCCTCTGCTTCCTCTGAGACCACTAGGTCCCGGCCGCATGGTCTCCCACACCCCAGCCCC
TCCTGCAAGCTTCCCTGTGCCATACCTTCCAGGGGACCCAGGTGCCCCATGCTCTAGTGTCCTCCCAACC
ACTGGCATCTTGACTCCTCACCCAGGACCTCAAGATTCCTGGAAAGAAGCCCCAGCCCCCAGGGGAAACC
TCCAGAGGAACAAGCTGCCAGAGACATTTATGCCCCCAGCACCAATTACTGCTCCAGTTATGAGCCTCAC
CCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTCCCCCAGGAGTT
CCAGGAGAACTCAGCCTGCAGCTTCAGCACCTGCCACCTGAGAAGATGGAAAGGAAGGAGCTGCCCCCAG
AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAA
GACAAAAAGGAAGCTGGAAGAGGCAGCCCAGCGTCTGGAGTATCTATATGAGAAGCTCTGTGAGGGGACA
CTCTCACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGG
GCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCT
GAAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAA

Translation (1179 aa):
MKLKELERPAVQAWSPASQYPLYLATGTSAQQLDSSFSTNGTLEIFEVDFRDPSLDLKHRGVLSALSRFH
KLVWGSFGSGLLESSGVIVGGGDNGMLILYNVTHILSSGKEPVIAQKQKHTGAVRALDLNPFQGNLLASG
ASDSEIFIWDLNNLNVPMTLGSKSQQPPEDIKALSWNRQAQHILSSAHPSGKAVVWDLRKNEPIIKVSDH
SNRMHCSGLAWHPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVLESHSRGILSVSWSQADAELLLTSA
KDSQILCRNLGSSEVVYKLPTQSSWCFDVQWCPRDPSVFSAASFNGWISLYSVMGRSWEVQHMRQADKIS
SSFSKGQPLPPLQVPEQVAQAPLIPPLKKPPKWIRRPTGVSFAFGGKLVTFGLPSTPAHLVPQPCPRLVF
ISQVTTESEFLMRSAELQEALGSGNLLNYCQNKSQQALLQSEKMLWQFLKVTLEQDSRMKFLKLLGYSKD
ELQKKVATWLKSDVGLGESPQPKGNDLNSDRQQAFCSQASKHTTKEASASSAFFDELVPQNMTPWEIPIT
KDIDGLLSQALLLGELGPAVELCLKEERFADAIILAQAGGTDLLKQTQERYLAKKKTKISSLLACVVQKN
WKDVVCTCSLKNWREALALLLTYSGTEKFPELCDMLGTRMEQEGSRALTSEARLCYVCSGSVERLVECWA
KCHQALSPMALQDLMEKVMVLNRSLEQLRGPHGVSPGPATTYRVTQYANLLAAQGSLATAMSFLPRDCAQ
PPVQQLRDRLFHAQGSAVLGQQSPPFPFPRIVVGATLHSKETSSYRLGSQPSHQVPTPSPRPRVFTPQSS
PAMPLAPSHPSPYQGPRTQNISDYRAPGPQAIQPLPLSPGVRPASSQPQLLGGQRVQVPNPVGFPGTWPL
PGSPLPMACPGIMRPGSTSLPETPRLFPLLPLRPLGPGRMVSHTPAPPASFPVPYLPGDPGAPCSSVLPT
TGILTPHPGPQDSWKEAPAPRGNLQRNKLPETFMPPAPITAPVMSLTPELQGILPSQPPVSSVSHAPPGV
PGELSLQLQHLPPEKMERKELPPEHQSLKSSFEALLQRCSLSATDLKTKRKLEEAAQRLEYLYEKLCEGT
LSPHVVAGLHEVARCVDAGSFEQGLAVHAQVAGCSSFSEVSSFMPILKAVLIIAHKLLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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