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Report for CCDS34363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34363.1 Public Homo sapiens 6 OR11A1 24 110 108 CCDS HistoryNCBI Gene:26531Re-query CCDS DB by CCDS ID:34363.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34363.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377148.5 ENSP00000366353.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377148.5Link to Ensembl Protein Viewer:ENSP00000366353.1Re-query CCDS DB by Nucleotide ID:ENST00000377148Re-query CCDS DB by Protein ID:ENSP00000366353
Original member Current member EBI ENST00000377149.5 ENSP00000366354.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377149.5Link to Ensembl Protein Viewer:ENSP00000366354.1Re-query CCDS DB by Nucleotide ID:ENST00000377149Re-query CCDS DB by Protein ID:ENSP00000366354
Original member Current member EBI ENST00000641152.2 ENSP00000493093.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641152.2Link to Ensembl Protein Viewer:ENSP00000493093.1Re-query CCDS DB by Nucleotide ID:ENST00000641152Re-query CCDS DB by Protein ID:ENSP00000493093
Original member Current member NCBI NM_001394828.1 NP_001381757.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394828.1Link to Protein Sequence:NP_001381757.1Re-query CCDS DB by Nucleotide ID:NM_001394828Re-query CCDS DB by Protein ID:NP_001381757Link to BLAST:NP_001381757.1
Original member Current member NCBI NM_001394829.1 NP_001381758.1 Accepted alive Link to Nucleotide Sequence:NM_001394829.1Link to Protein Sequence:NP_001381758.1Re-query CCDS DB by Nucleotide ID:NM_001394829Re-query CCDS DB by Protein ID:NP_001381758Link to BLAST:NP_001381758.1
Original member Current member NCBI NM_013937.4 NP_039225.1 Accepted alive Link to Nucleotide Sequence:NM_013937.4Link to Protein Sequence:NP_039225.1Re-query CCDS DB by Nucleotide ID:NM_013937Re-query CCDS DB by Protein ID:NP_039225Link to BLAST:NP_039225.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381757.1 315 Q9GZK7 315 100% 0 0
NP_001381758.1 315 Q9GZK7 315 100% 0 0
NP_039225.1 315 Q9GZK7 315 100% 0 0

Chromosomal Locations for CCDS 34363.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 29426694 29427641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGAAATTGTCTCCACAGGAAACGAAACTATTACTGAATTTGTCCTCCTTGGCTTCTATGACATCCCTG
AACTGCATTTCTTGTTTTTTATTGTATTCACTGCTGTCTATGTCTTCATCATCATAGGGAATATGCTGAT
TATTGTAGCAGTGGTTAGCTCCCAGAGGCTCCACAAACCCATGTATATTTTCTTGGCGAATCTGTCCTTC
CTGGATATTCTCTACACCTCCGCAGTGATGCCAAAAATGCTGGAGGGCTTCCTGCAAGAAGCAACTATCT
CTGTGGCTGGTTGCTTGCTCCAGTTCTTTATCTTCGGCTCTCTAGCCACAGCTGAATGCTTACTGCTGGC
TGTCATGGCATATGACCGCTACCTGGCAATTTGCTACCCACTCCACTACCCACTCCTGATGGGGCCCAGA
CGGTACATGGGGCTGGTGGTCACAACCTGGCTCTCTGGATTTGTGGTAGATGGACTGGTTGTGGCCCTGG
TGGCCCAGCTGAGGTTCTGTGGCCCCAACCACATTGACCAGTTTTACTGTGACTTTATGCTTTTCGTGGG
CCTGGCTTGCTCGGATCCCAGAGTGGCTCAGGTGACAACTCTCATTCTGTCTGTGTTCTGCCTCACTATT
CCTTTTGGACTGATTCTGACATCTTATGCCAGAATTGTGGTGGCAGTGCTGAGAGTTCCTGCTGGGGCAA
GCAGGAGAAGGGCTTTCTCCACATGCTCCTCCCACCTAGCTGTAGTGACCACATTCTATGGAACGCTCAT
GATCTTTTATGTTGCACCCTCTGCTGTCCATTCCCAGCTCCTCTCCAAGGTCTTCTCCCTGCTCTACACT
GTGGTCACCCCTCTCTTCAATCCTGTGATCTATACCATGAGGAACAAGGAGGTGCATCAGGCACTTCGGA
AGATTCTCTGTATCAAACAAACTGAAACACTTGATTGA

Translation (315 aa):
MEIVSTGNETITEFVLLGFYDIPELHFLFFIVFTAVYVFIIIGNMLIIVAVVSSQRLHKPMYIFLANLSF
LDILYTSAVMPKMLEGFLQEATISVAGCLLQFFIFGSLATAECLLLAVMAYDRYLAICYPLHYPLLMGPR
RYMGLVVTTWLSGFVVDGLVVALVAQLRFCGPNHIDQFYCDFMLFVGLACSDPRVAQVTTLILSVFCLTI
PFGLILTSYARIVVAVLRVPAGASRRRAFSTCSSHLAVVTTFYGTLMIFYVAPSAVHSQLLSKVFSLLYT
VVTPLFNPVIYTMRNKEVHQALRKILCIKQTETLD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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