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Report for CCDS10341.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10341.1 Public Homo sapiens 15 MRPL46 24 110 108 CCDS HistoryNCBI Gene:26589Re-query CCDS DB by CCDS ID:10341.1Re-query CCDS DB by GeneID:26589See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10341.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312475.5 ENSP00000312311.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000312475.5Link to Ensembl Protein Viewer:ENSP00000312311.4Re-query CCDS DB by Nucleotide ID:ENST00000312475Re-query CCDS DB by Protein ID:ENSP00000312311
Original member Current member NCBI NM_022163.4 NP_071446.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022163.4Link to Protein Sequence:NP_071446.2Re-query CCDS DB by Nucleotide ID:NM_022163Re-query CCDS DB by Protein ID:NP_071446Link to BLAST:NP_071446.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071446.2 279 Q9H2W6 279 100% 0 0

Chromosomal Locations for CCDS 10341.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 88459613 88459863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88464703 88464876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88465587 88465773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88467150 88467377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGGCGGCGCCCGTAAGGCGGACGCTGTTAGGGGTGGCGGGGGGTTGGCGGCGGTTCGAGAGGCTCTGGG
CCGGCAGTCTAAGCTCTCGCAGCCTGGCTCTTGCAGCCGCACCCTCAAGCAACGGATCCCCATGGCGCTT
GTTGGGCGCGTTGTGCCTGCAGCGGCCACCTGTAGTCTCCAAGCCGTTGACCCCATTGCAGGAAGAGATG
GCGTCTCTACTGCAGCAGATTGAGATAGAGAGAAGCCTGTATTCAGACCACGAGCTTCGTGCTCTGGATG
AAAACCAGCGACTGGCAAAGAAGAAAGCTGACCTTCATGATGAAGAAGATGAACAGGATATATTGCTGGC
GCAAGATTTGGAAGATATGTGGGAGCAGAAATTTCTACAGTTCAAACTTGGAGCTCGCATAACAGAAGCT
GATGAAAAGAATGACCGAACATCCCTGAACAGGAAGCTAGACAGGAACCTTGTCCTGTTAGTCAGAGAGA
AGTTTGGAGACCAGGATGTTTGGATACTGCCCCAGGCAGAGTGGCAGCCTGGGGAGACCCTTCGAGGAAC
AGCTGAACGAACCCTGGCCACACTCTCAGAAAACAACATGGAAGCCAAGTTCCTAGGAAATGCACCCTGT
GGGCACTACACATTCAAGTTCCCCCAGGCAATGCGGACAGAGAGTAACCTCGGAGCCAAGGTGTTCTTCT
TCAAAGCACTGCTATTAACTGGAGACTTTTCCCAGGCTGGGAATAAGGGCCATCATGTGTGGGTCACTAA
GGATGAGCTGGGTGACTATTTGAAACCAAAATACCTGGCCCAAGTTAGGAGGTTTGTTTCAGACCTCTGA

Translation (279 aa):
MAAPVRRTLLGVAGGWRRFERLWAGSLSSRSLALAAAPSSNGSPWRLLGALCLQRPPVVSKPLTPLQEEM
ASLLQQIEIERSLYSDHELRALDENQRLAKKKADLHDEEDEQDILLAQDLEDMWEQKFLQFKLGARITEA
DEKNDRTSLNRKLDRNLVLLVREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPC
GHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGHHVWVTKDELGDYLKPKYLAQVRRFVSDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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