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Report for CCDS4656.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4656.1 Public Homo sapiens 6 OR2W1 24 110 108 CCDS HistoryNCBI Gene:26692Re-query CCDS DB by CCDS ID:4656.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4656.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377175.2 ENSP00000366380.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377175.2Link to Ensembl Protein Viewer:ENSP00000366380.1Re-query CCDS DB by Nucleotide ID:ENST00000377175Re-query CCDS DB by Protein ID:ENSP00000366380
Original member Current member NCBI NM_030903.3 NP_112165.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030903.3Link to Protein Sequence:NP_112165.1Re-query CCDS DB by Nucleotide ID:NM_030903Re-query CCDS DB by Protein ID:NP_112165Link to BLAST:NP_112165.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112165.1 320 Q9Y3N9 320 100% 0 0

Chromosomal Locations for CCDS 4656.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 29044213 29045175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGGACCAAAGCAATTATAGTTCTTTACATGGTTTTATTCTGCTTGGCTTCTCTAACCATCCAAAAATGG
AGATGATCCTGTCAGGAGTTGTCGCCATCTTCTACTTAATTACATTGGTGGGTAACACAGCCATCATTCT
TGCATCTCTCCTGGATTCCCAGCTTCATACACCAATGTACTTTTTCCTCAGAAATTTATCTTTCCTAGAT
CTATGTTTCACAACCAGCATCATCCCTCAGATGCTGGTCAACTTGTGGGGACCTGATAAGACCATCAGCT
ATGTGGGTTGTATCATCCAACTCTATGTTTACATGTGGTTGGGCTCAGTTGAGTGCCTTCTCCTGGCTGT
TATGTCCTATGATCGTTTTACAGCTATATGTAAGCCCTTGCATTATTTTGTAGTCATGAACCCACATCTA
TGTCTAAAGATGATTATCATGATCTGGAGTATTAGTTTGGCCAATTCTGTAGTATTATGTACACTCACTC
TGAATTTGCCCACATGTGGAAACAACATTCTGGATCATTTCTTGTGTGAGTTGCCAGCTCTGGTCAAGAT
AGCTTGTGTAGACACCACAACAGTTGAAATGTCTGTTTTCGCTTTAGGCATTATAATTGTCCTCACACCT
CTCATCCTTATTCTTATATCCTATGGCTACATTGCCAAAGCTGTGCTGAGAACGAAGTCAAAAGCAAGCC
AGCGAAAAGCAATGAATACCTGTGGATCTCATCTTACTGTAGTGTCTATGTTCTATGGAACTATTATCTA
CATGTACCTGCAACCAGGTAACAGGGCTTCCAAAGACCAGGGCAAGTTCCTCACCCTCTTTTACACCGTC
ATCACTCCAAGTCTCAACCCGCTCATTTACACCTTAAGAAATAAGGACATGAAGGATGCCCTGAAGAAAC
TGATGAGATTTCACCACAAATCTACAAAAATAAAGAGGAATTGCAAGTCATAG

Translation (320 aa):
MDQSNYSSLHGFILLGFSNHPKMEMILSGVVAIFYLITLVGNTAIILASLLDSQLHTPMYFFLRNLSFLD
LCFTTSIIPQMLVNLWGPDKTISYVGCIIQLYVYMWLGSVECLLLAVMSYDRFTAICKPLHYFVVMNPHL
CLKMIIMIWSISLANSVVLCTLTLNLPTCGNNILDHFLCELPALVKIACVDTTTVEMSVFALGIIIVLTP
LILILISYGYIAKAVLRTKSKASQRKAMNTCGSHLTVVSMFYGTIIYMYLQPGNRASKDQGKFLTLFYTV
ITPSLNPLIYTLRNKDMKDALKKLMRFHHKSTKIKRNCKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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