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Report for CCDS23795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23795.1 Public Mus musculus 10 Cdk19 23 108 98 CCDS HistoryNCBI Gene:78334Re-query CCDS DB by CCDS ID:23795.1Re-query CCDS DB by GeneID:78334See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23795.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095743.3 ENSMUSP00000093414.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095743.3Link to Ensembl Protein Viewer:ENSMUSP00000093414.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000095743Re-query CCDS DB by Protein ID:ENSMUSP00000093414
Original member Current member NCBI NM_198164.3 NP_937807.2 Accepted alive Link to Nucleotide Sequence:NM_198164.3Link to Protein Sequence:NP_937807.2Re-query CCDS DB by Nucleotide ID:NM_198164Re-query CCDS DB by Protein ID:NP_937807Link to BLAST:NP_937807.2

Chromosomal Locations for CCDS 23795.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 40349594 40349721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40394325 40394400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40434304 40434414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40436072 40436212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40454015 40454072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40469579 40469722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40469886 40469955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40475569 40475641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40476157 40476254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40476889 40476967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40477702 40477968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40479675 40479803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGGATTATGATTTCAAGGCGAAGCTGGCGGCGGAGCGGGAGCGGGTGGAGGATCTGTTTGAGTACGAAG
GGTGCAAAGTGGGACGCGGCACCTACGGGCATGTCTACAAGGCGAGGCGGAAAGATGGAAAAGATGAAAA
GGAATATGCACTTAAGCAAATCGAAGGCACAGGAATATCTATGTCGGCTTGTAGAGAGATTGCACTTTTG
AGAGAACTGAAGCACCCTAATGTGATCGCATTGCAGAAGGTGTTCCTTTCTCACAGCGACAGGAAGGTGT
GGCTGCTGTTTGACTATGCAGAACATGACCTTTGGCATATTATTAAGTTTCACCGTGCATCAAAAGCAAA
TAAAAAGCCCATGCAGTTACCAAGATCCATGGTTAAATCACTGCTGTACCAGATCCTCGATGGCATCCAT
TACCTCCACGCAAACTGGGTGCTCCACAGGGACCTGAAACCAGCAAATATCCTAGTAATGGGAGAAGGTC
CTGAAAGGGGGAGAGTCAAAATAGACATCTGGGCAATAGGCTGCATATTTGCTGAACTCTTGACTTCAGA
ACCCATTTTTCACTGTCGTCAGGAGGATATAAAAACAAGCAATCCTTTTCATCATGATCAGTTAGATCGA
ATATTTAGTGTCATGGGGTTTCCTGCAGATAAAGACTGGGAAGATATTAGAAAAATGCCAGAGTACCCAA
CACTTCAGAAAGACTTTCGAAGAACAACGTACGCCAACAGCAGCCTCATAAAATACATGGAGAAGCACAA
GGTCAAGCCTGACAGCAAAGTGTTCCTCCTGCTTCAGAAACTCCTCACCATGGATCCAACCAAGAGAATC
ACCTCAGAGCAGGCTCTGCAGGACCCTTACTTCCAGGAAGACCCCCTGCCAACATTAGATGTGTTCGCTG
GCTGCCAGATTCCGTACCCCAAAAGAGAATTCCTTAATGAAGATGAACCAGAAGAGAAAGGTGACAAGAA
CCAGCCACAGCAGCAGAACCCACATCAGCAACCTGCAGCCCCCGCACAGCAGACAGCAGCCCCCCCACAG
GCTCCTCCACCACAGCAGAGCAGTGCCCAAACCAATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGG
GCGCTGGAGCGGGGCTGCAGCACAGCCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCG
GATTGGGCCTTCCGGTGCAAACTCAGGCGGGCCCGTTATGCCGTCGGATTATCAGCATTCCAGTTCTCGC
CTGAATTACCAAAGCAGCGTACAGGGGTCCTCTCAGTCCCAGAGTACGCTAGGCTACTCTTCATCTCAAC
AGAGTACCCAGTACCACTCATCTCACCAGACCCACCGGTACTGA

Translation (457 aa):
MDYDFKAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQIEGTGISMSACREIALL
RELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH
YLHANWVLHRDLKPANILVMGEGPERGRVKIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDR
IFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRI
TSEQALQDPYFQEDPLPTLDVFAGCQIPYPKREFLNEDEPEEKGDKNQPQQQNPHQQPAAPAQQTAAPPQ
APPPQQSSAQTNGTAGGATAGGGGAGAGLQHSQDPGLNQVPPNKKPRIGPSGANSGGPVMPSDYQHSSSR
LNYQSSVQGSSQSQSTLGYSSSQQSTQYHSSHQTHRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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