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Report for CCDS21328.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21328.1 Public Mus musculus 7 Peg12 23 108 98 CCDS HistoryNCBI Gene:27412Re-query CCDS DB by CCDS ID:21328.1Re-query CCDS DB by GeneID:27412See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21328.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094339.2 ENSMUSP00000091897.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094339.2Link to Ensembl Protein Viewer:ENSMUSP00000091897.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000094339Re-query CCDS DB by Protein ID:ENSMUSP00000091897
Original member Current member NCBI NM_013788.2 NP_038816.1 Accepted alive Link to Nucleotide Sequence:NM_013788.2Link to Protein Sequence:NP_038816.1Re-query CCDS DB by Nucleotide ID:NM_013788Re-query CCDS DB by Protein ID:NP_038816Link to BLAST:NP_038816.1

Chromosomal Locations for CCDS 21328.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 62463496 62464347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGCCGTGCCGGAGGGAAGAGGAAGCCGGCGACGAGGCGGAGGGGGAGGAGGACGACAACAGCTTCCTCC
TG
CTGCAGCAGTCCGTGACTCTGGGGGGCTCTGCCGACGTGGACCGGCTCATCGCCCAGATCGGCGAGAC
G
CTGCAGCTGGACGCCAGGCACGATGGCCCGGCCTCGCCATGTGCTGCCCCGGGCCCCCCGCCCGCGCCC
CCG
CGGGTCCTGGCCGCGCTGCCGGCGGACAAGGCCGGGGCCCCAGCGAGGCGGCTGCTACGGAGAGCAG
CA
TCAGCGGAGGCCGGGGACCCTGCGCCCCCGGGGGCTGTGCGCTGCGTGCTGGGGGAGCGCGGGCGCCT
G
CGGGGCCGGGCGGCGCCCTACTGTGTGGCGGAGATCGCCCCGGGCGCCAGCGCGCTGCCCCAGCAGCTC
GGC
CTTGAGGTATCCCCGGGGATGGGCAAAGTAAGCATCCCGCAGCCACTGTCCGGCCGGTGCCGGCGGG
GT
TGGCTCCGGAACGCAGCCGCGTCCCGCCGCCAGCAACAGCGACGCGGATCTCAGTCGGAGACCCGCAC
G
AGTGACGGCGACCCGCCCCGACTCCTGCAGCAGCTCCTTCTTTCGGGAAACCTCATCAAGGAGGCGGTG
CGG
AGACTTCATTCGCGAGGGCTACAGCTACAGGCAAAGCTTCCCGCTCACTCGTTCCTCGGGCCTTTGT
CA
GCCCCGGTGCATGAGCCGCCTTTGCCCGGGAGCCCCCGTGCAGCCTGCAGCGACCCTGGCGATTGTGA
T
GGAGGGCACAGCTCAGAACTAGGGACGACCTTCTTGTCCCTGGCAGCTAATAACCCCGGTGGCCACAGC
ACC
AACCTGTAG


Translation (283 aa):
MPCRREEEAGDEAEGEEDDNSFLLLQQSVTLGGSADVDRLIAQIGETLQLDARHDGPASPCAAPGPPPAP
P
RVLAALPADKAGAPARRLLRRAASAEAGDPAPPGAVRCVLGERGRLRGRAAPYCVAEIAPGASALPQQL
G
LEVSPGMGKVSIPQPLSGRCRRGWLRNAAASRRQQQRRGSQSETRTSDGDPPRLLQQLLLSGNLIKEAV
R
RLHSRGLQLQAKLPAHSFLGPLSAPVHEPPLPGSPRAACSDPGDCDGGHSSELGTTFLSLAANNPGGHS
T
NL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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