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Report for CCDS6333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6333.1 Public Homo sapiens 8 MTBP 24 110 108 CCDS HistoryNCBI Gene:27085Re-query CCDS DB by CCDS ID:6333.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305949.6 ENSP00000303398.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305949.6Link to Ensembl Protein Viewer:ENSP00000303398.1Re-query CCDS DB by Nucleotide ID:ENST00000305949Re-query CCDS DB by Protein ID:ENSP00000303398
Original member Current member NCBI NM_022045.5 NP_071328.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022045.5Link to Protein Sequence:NP_071328.2Re-query CCDS DB by Nucleotide ID:NM_022045Re-query CCDS DB by Protein ID:NP_071328Link to BLAST:NP_071328.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071328.2 904 Q96DY7-1 904 100% 0 0

Chromosomal Locations for CCDS 6333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 120445471 120445588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120446433 120446513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120451003 120451076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120451171 120451322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120453847 120453905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120455435 120455579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120456553 120456670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120459215 120459349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120461161 120461255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120463692 120463761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120470820 120470937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120488159 120488332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120490463 120490570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120497393 120497554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120502492 120502609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120506706 120506861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120509934 120510029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120515925 120516191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120517851 120518100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120518704 120518817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120522654 120522719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120523298 120523336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2715 nt):
ATGGATCGGTACCTGCTGCTGGTGATCTGGGGGGAAGGAAAATTCCCGTCGGCGGCCAGTAGGGAGGCAG
AACATGGGCCAGAGGTGTCGTCGGGTGAGGGTACTGAGAATCAGCCGGACTTCACAGCAGCAAATGTTTA
TCACCTCTTGAAAAGAAGCATTAGTGCTTCAATTAATCCAGAAGATAGTACTTTCCCTGCCTGTTCAGTG
GGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTGCAGTGCAGGCAATATATGGATTTTATCAGTTTTGTA
GTTCTGATTGGCAAGAGATACATTTTGATACAGAAAAAGATAAAATTGAAGATGTTCTTCAAACGAATAT
CGAAGAATGTTTGGGTGCTGTTGAGTGTTTTGAAGAAGAAGACAGTAATAGCAGGGAATCATTATCCTTG
GCTGATCTCTATGAAGAAGCTGCAGAAAATTTGCATCAGCTGTCAGACAAGCTTCCTGCTCCTGGTAGAG
CAATGGTAGATATAATACTGTTGCTTTCTGACAAAGATCCTCCTAAATTGAAAGACTATTTACCTACTGT
AGGAGCATTAAAACATTTGAGAGAATGGTATTCAGCAAAGATCACTATAGCAGGAAATCATTGTGAAATA
AACTGTCAGAAAATTGCAGAATACCTTTCTGCTAATGTTGTATCTTTAGAAGATCTCAGAAATGTTATTG
ACTCAAAGGAATTATGGAGGGGGAAAATACAGATATGGGAAAGAAAGTTTGGATTTGAAATTAGTTTTCC
TGAATTTTGTTTAAAGGGAGTCACACTTAAGAATTTTAGTACTTCTAATTTAAATACTGACTTCCTTGCC
AAAAAGATCATACCATCAAAGGATAAGAATATTTTGCCAAAGGTTTTCCATTATTATGGCCCTGCTTTAG
AATTTGTGCAGATGATAAAATTATCAGATCTACCCTCCTGCTATATGTCGGATATTGAATTTGAGTTAGG
ATTGACAAACAGTACCAAACAGAATTCTGTGTTGCTGTTGGAGCAGATTTCTTCTCTGTGTAGCAAGGTT
GGTGCTCTTTTTGTATTGCCATGTACCATTAGTAACATACTGATTCCACCTCCCAACCAACTCAGTTCAA
GAAAATGGAAGGAATATATAGCTAAAAAGCCTAAAACAATCAGTGTTCCAGATGTTGAAGTGAAAGGAGA
GTGTTCTAGCTATTATCTCTTGTTACAAGGTAATGGCAATAGAAGATGTAAAGCCACATTGATTCACTCA
GCCAACCAGATCAATGGCTCATTTGCACTCAATTTAATTCATGGAAAGATGAAAACAAAGACAGAAGAAG
CCAAATTGAGTTTTCCTTTTGACTTATTATCACTTCCACATTTTTCTGGGGAGCAGATTGTACAGAGAGA
GAAACAGTTAGCTAATGTTCAAGTTTTAGCTTTGGAAGAATGCCTAAAAAGACGAAAGTTGGCAAAGCAG
CCTGAAACAGTTTCTGTTGCTGAACTCAAAAGTCTGTTAGTACTCACAAGGAAACACTTTTTAGATTATT
TTGATGCTGTGATTCCTAAAATGATTCTAAGAAAGATGGACAAAATTAAAACCTTCAATATATTAAATGA
TTTTAGTCCAGTGGAACCTAATTCCTCAAGTCTAATGGAAACCAATCCTCTGGAATGGCCAGAAAGGCAT
GTTCTTCAAAATTTGGAAACTTTTGAAAAAACTAAACAAAAAATGAGAACTGGTTCATTACCTCATTCAT
CTGAACAGTTGCTGGGCCACAAAGAGGGTCCTCGGGACTCAATCACATTGTTGGATGCTAAAGAATTGCT
GAAGTACTTTACCTCAGATGGATTACCCATTGGAGATCTTCAACCTTTACCGATTCAAAAGGGGGAAAAG
ACTTTTGTTTTGACACCAGAACTTAGTCCTGGGAAACTTCAGGTCTTACCTTTTGAGAAAGCCTCAGTAT
GTCATTATCATGGAATTGAATATTGCTTGGATGACCGAAAAGCTTTGGAAAGAGATGGAGGATTTTCTGA
ACTTCAGTCTCGTCTTATTCGTTATGAAACTCAAACTACCTGCACCAGAGAAAGTTTTCCAGTACCTACT
GTGTTGAGCCCTCTTCCATCTCCTGTAGTTTCGTCAGATCCTGGAAGTGTCCCTGACGGAGAAGTTTTAC
AAAATGAACTTCGAACTGAAGTATCCCGATTGAAACGGAGATCTAAAGATCTGAATTGCCTTTATCCCAG
AAAAAGACTTGTGAAATCTGAAAGTTCAGAGTCTCTTCTTTCTCAGACAACTGGTAATAGTAATCACTAT
CATCATCATGTGACATCCAGAAAGCCACAAACAGAACGGTCCTTACCAGTGACTTGTCCATTGGTTCCAA
TTCCTAGCTGTGAAACTCCAAAACTTGCTACAAAGACCAGTTCAGGTCAAAAAAGTATGCATGAATCAAA
AACATCAAGGCAAATTAAGGAATCAAGATCACAGAAACACACACGGATACTGAAAGAAGTAGTTACTGAA
ACCCTGAAGAAACACAGTATTACCGAGACTCATGAATGTTTCACTGCATGCAGCCAGCGTCTCTTTGAAA
TCTCTAAGTTCTATCTAAAGGATCTTAAAACTTCAAGGGGTCTATTTGAAGAAATGAAGAAAACAGCAAA
CAACAATGCTGTACAGGTGATTGACTGGGTATTAGAAAAGACAAGCAAGAAATGA

Translation (904 aa):
MDRYLLLVIWGEGKFPSAASREAEHGPEVSSGEGTENQPDFTAANVYHLLKRSISASINPEDSTFPACSV
GGIPGSKKWFFAVQAIYGFYQFCSSDWQEIHFDTEKDKIEDVLQTNIEECLGAVECFEEEDSNSRESLSL
ADLYEEAAENLHQLSDKLPAPGRAMVDIILLLSDKDPPKLKDYLPTVGALKHLREWYSAKITIAGNHCEI
NCQKIAEYLSANVVSLEDLRNVIDSKELWRGKIQIWERKFGFEISFPEFCLKGVTLKNFSTSNLNTDFLA
KKIIPSKDKNILPKVFHYYGPALEFVQMIKLSDLPSCYMSDIEFELGLTNSTKQNSVLLLEQISSLCSKV
GALFVLPCTISNILIPPPNQLSSRKWKEYIAKKPKTISVPDVEVKGECSSYYLLLQGNGNRRCKATLIHS
ANQINGSFALNLIHGKMKTKTEEAKLSFPFDLLSLPHFSGEQIVQREKQLANVQVLALEECLKRRKLAKQ
PETVSVAELKSLLVLTRKHFLDYFDAVIPKMILRKMDKIKTFNILNDFSPVEPNSSSLMETNPLEWPERH
VLQNLETFEKTKQKMRTGSLPHSSEQLLGHKEGPRDSITLLDAKELLKYFTSDGLPIGDLQPLPIQKGEK
TFVLTPELSPGKLQVLPFEKASVCHYHGIEYCLDDRKALERDGGFSELQSRLIRYETQTTCTRESFPVPT
VLSPLPSPVVSSDPGSVPDGEVLQNELRTEVSRLKRRSKDLNCLYPRKRLVKSESSESLLSQTTGNSNHY
HHHVTSRKPQTERSLPVTCPLVPIPSCETPKLATKTSSGQKSMHESKTSRQIKESRSQKHTRILKEVVTE
TLKKHSITETHECFTACSQRLFEISKFYLKDLKTSRGLFEEMKKTANNNAVQVIDWVLEKTSKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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