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Report for CCDS2943.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2943.1 Public Homo sapiens 3 ZBTB11 24 110 108 CCDS HistoryNCBI Gene:27107Re-query CCDS DB by CCDS ID:2943.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2943.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312938.5 ENSP00000326200.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000312938.5Link to Ensembl Protein Viewer:ENSP00000326200.4Re-query CCDS DB by Nucleotide ID:ENST00000312938Re-query CCDS DB by Protein ID:ENSP00000326200
Original member Current member NCBI NM_014415.4 NP_055230.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014415.4Link to Protein Sequence:NP_055230.2Re-query CCDS DB by Nucleotide ID:NM_014415Re-query CCDS DB by Protein ID:NP_055230Link to BLAST:NP_055230.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055230.2 1053 O95625 1053 100% 0 0

Chromosomal Locations for CCDS 2943.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101651166 101651683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101652496 101652671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101652780 101652938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101654704 101654821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101656104 101656248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101659783 101660028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101664538 101664714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101664964 101665808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101671130 101671361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101671978 101672213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101676605 101676914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3162 nt):
ATGTCAAGCGAGGAAAGCTACCGGGCCATCCTGCGTTACCTGACGAACGAGCGCGAGCCGTATGCGCCGG
GCACCGAGGGCAATGTCAAGCGTAAAATCCGAAAAGCTGCCGCCTGCTACGTGGTGCGCGGCGGGACTCT
GTATTACCAGCGGCGGCAGCGGCACCGCAAGACCTTCGCGGAGCTGGAGGTGGTGCTGCAGCCGGAGCGA
CGCCGGGACCTCATCGAGGCGGCGCACCTGGGTCCCGGCGGCACTCACCACACCCGGCATCAGACCTGGC
ACTACTTGTCCAAGACGTACTGGTGGCGAGGTATATTGAAGCAAGTCAAAGATTACATTAAACAGTGTAG
CAAATGCCAGGAGAAACTAGATCGATCCCGTCCAATATCAGATGTTTCAGAAATGTTGGAAGAATTGGGA
CTAGACCTTGAATCTGGAGAAGAAAGTAATGAATCGGAAGATGACCTGAGCAACTTTACTTCATCTCCAA
CTACAGCATCCAAGCCTGCAAAAAAGAAGCCAGTATCCAAACATGAACTTGTGTTTGTTGACACCAAAGG
AGTGGTAAAACGTTCTTCTCCAAAACATTGTCAGGCTGTCTTAAAACAGCTGAACGAACAGAGACTTTCC
AACCAGTTCTGTGATGTTACTTTGTTAATTGAAGGAGAAGAGTACAAAGCTCATAAATCTGTTTTGTCAG
CAAATAGCGAGTATTTTCGAGATCTTTTTATTGAGAAAGGAGCTGTTTCCAGTCATGAGGCTGTGGTGGA
TCTTTCTGGTTTTTGTAAGGCCAGCTTCCTTCCTTTACTGGAATTTGCCTATACTTCTGTACTAAGTTTT
GATTTCTGTAGCATGGCTGATGTAGCCATCTTAGCTCGTCATCTTTTCATGTCAGAAGTCTTAGAGATTT
GTGAAAGTGTACATAAGCTAATGGAAGAGAAGCAGCTAACAGTATATAAGAAGGGCGAAGTACAAACAGT
TGCATCCACCCAGGACTTACGAGTACAGAATGGAGGTACAGCACCTCCTGTTGCTAGCAGTGAGGGAACC
ACAACAAGTTTACCTACTGAACTTGGGGATTGTGAAATTGTACTACTGGTAAATGGAGAATTGCCAGAAG
CTGAGCAGAATGGAGAGGTAGGACGACAGCCTGAGCCCCAGGTTTCTTCAGAGGCTGAATCTGCCCTGTC
ATCAGTAGGATGTATAGCTGATTCCCATCCTGAAATGGAGTCTGTTGATTTAATAACAAAAAACAACCAG
ACAGAACTAGAAACTTCAAACAACAGAGAAAATAACACAGTTTCTAATATACACCCTAAACTTTCAAAAG
AGAATGTAATTAGTAGCTCGCCAGAGGATAGTGGTATGGGAAATGATATATCAGCTGAGGATATTTGTGC
CGAAGACATTCCAAAACATAGGCAGAAAGTTGACCAACCTTTAAAAGATCAGGAAAATCTAGTTGCATCA
ACAGCAAAGACAGACTTTGGCCCTGATGATGATACTTATAGAAGCAGGCTTCGACAACGTTCTGTTAATG
AAGGGGCATATATTCGACTACACAAGGGAATGGAGAAAAAGCTGCAGAAACGGAAAGCCGTTCCCAAGTC
AGCAGTTCAACAGGTGGCTCAGAAGTTAGTTCAAAGAGGAAAAAAGATGAAACAGCCAAAAAGAGATGCT
AAAGAGAACACAGAAGAAGCATCTCATAAATGTGGGGAATGTGGAATGGTTTTTCAGAGACGATACGCCC
TTATAATGCACAAACTGAAACATGAAAGAGCTAGAGATTACAAATGTCCATTGTGTAAAAAACAGTTTCA
GTACAGTGCCTCTTTGCGAGCACATCTTATTCGTCATACCAGAAAAGATGCACCCTCTTCATCCTCGTCC
AATTCCACGTCTAATGAAGCATCGGGAACATCATCTGAGAAGGGCAGAACCAAGCGGGAATTTATATGTT
CCATATGTGGAAGAACATTACCTAAATTATATTCTCTCCGAATACATATGTTAAAGCACACAGGTGTAAA
GCCACATGCATGCCAGGTCTGTGGAAAGACTTTTATCTATAAGCATGGTCTAAAATTACATCAGAGTCTT
CATCAATCACAGAAGCAGTTCCAGTGTGAACTGTGTGTTAAGTCATTTGTTACCAAACGGAGTCTTCAAG
AACATATGAGTATTCACACAGGAGAGTCCAAGTACCTTTGCTCAGTTTGTGGAAAGTCTTTTCATAGGGG
CTCTGGACTCAGCAAGCACTTCAAGAAACACCAACCAAAGCCTGAGGTTCGAGGCTATCATTGTACTCAA
TGTGAAAAAAGTTTCTTTGAAGCTAGAGATCTTCGCCAGCACATGAACAAACATCTTGGTGTGAAGCCAT
TCCAGTGCCAATTTTGTGATAAGTGCTATAGTTGGAAGAAAGATTGGTATTCCCATGTGAAGTCTCATTC
TGTCACTGAGCCTTATAGGTGTAATATATGTGGCAAAGAATTTTATGAAAAAGCTTTGTTCAGAAGGCAT
GTAAAGAAAGCTACCCATGGGAAGAAAGGAAGAGCAAAGCAAAACCTGGAACGGGTGTGTGAAAAATGTG
GAAGAAAATTCACTCAGCTAAGAGAGTATAGGAGACACATGAACAACCATGAAGGAGTTAAGCCATTTGA
GTGCTTAACATGTGGAGTAGCTTGGGCTGATGCCCGATCTCTAAAACGCCATGTCAGAACACATACTGGT
GAACGGCCCTATGTCTGTCCTGTATGTAGCGAAGCCTACATAGATGCTCGAACACTCCGTAAACATATGA
CTAAATTCCACAGAGACTATGTGCCTTGCAAAATTATGCTGGAAAAAGACACCCTTCAGTTTCATAACCA
AGGAACTCAAGTGGCACATGCTGTTAGCATCTTAACAGCAGGCATGCAGGAACAAGAAAGCAGTGGTCCT
CAAGAACTTGAGACTGTGGTAGTGACAGGAGAAACTATGGAAGCTCTGGAAGCTGTTGCAGCTACTGAAG
AGTATCCATCGGTATCTACACTTTCTGACCAAAGTATTATGCAAGTGGTTAATTATGTATTAGCACAACA
GCAAGGACAGAAGCTATCTGAAGTTGCAGAAGCTATTCAAACTGTTAAAGTAGAGGTAGCACATATTTCA
GGAGGAGAATGA

Translation (1053 aa):
MSSEESYRAILRYLTNEREPYAPGTEGNVKRKIRKAAACYVVRGGTLYYQRRQRHRKTFAELEVVLQPER
RRDLIEAAHLGPGGTHHTRHQTWHYLSKTYWWRGILKQVKDYIKQCSKCQEKLDRSRPISDVSEMLEELG
LDLESGEESNESEDDLSNFTSSPTTASKPAKKKPVSKHELVFVDTKGVVKRSSPKHCQAVLKQLNEQRLS
NQFCDVTLLIEGEEYKAHKSVLSANSEYFRDLFIEKGAVSSHEAVVDLSGFCKASFLPLLEFAYTSVLSF
DFCSMADVAILARHLFMSEVLEICESVHKLMEEKQLTVYKKGEVQTVASTQDLRVQNGGTAPPVASSEGT
TTSLPTELGDCEIVLLVNGELPEAEQNGEVGRQPEPQVSSEAESALSSVGCIADSHPEMESVDLITKNNQ
TELETSNNRENNTVSNIHPKLSKENVISSSPEDSGMGNDISAEDICAEDIPKHRQKVDQPLKDQENLVAS
TAKTDFGPDDDTYRSRLRQRSVNEGAYIRLHKGMEKKLQKRKAVPKSAVQQVAQKLVQRGKKMKQPKRDA
KENTEEASHKCGECGMVFQRRYALIMHKLKHERARDYKCPLCKKQFQYSASLRAHLIRHTRKDAPSSSSS
NSTSNEASGTSSEKGRTKREFICSICGRTLPKLYSLRIHMLKHTGVKPHACQVCGKTFIYKHGLKLHQSL
HQSQKQFQCELCVKSFVTKRSLQEHMSIHTGESKYLCSVCGKSFHRGSGLSKHFKKHQPKPEVRGYHCTQ
CEKSFFEARDLRQHMNKHLGVKPFQCQFCDKCYSWKKDWYSHVKSHSVTEPYRCNICGKEFYEKALFRRH
VKKATHGKKGRAKQNLERVCEKCGRKFTQLREYRRHMNNHEGVKPFECLTCGVAWADARSLKRHVRTHTG
ERPYVCPVCSEAYIDARTLRKHMTKFHRDYVPCKIMLEKDTLQFHNQGTQVAHAVSILTAGMQEQESSGP
QELETVVVTGETMEALEAVAATEEYPSVSTLSDQSIMQVVNYVLAQQQGQKLSEVAEAIQTVKVEVAHIS
GGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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