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Report for CCDS9482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9482.1 Public Homo sapiens 13 OXGR1 24 110 108 CCDS HistoryNCBI Gene:27199Re-query CCDS DB by CCDS ID:9482.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9482.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298440.5 ENSP00000298440.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000298440.5Link to Ensembl Protein Viewer:ENSP00000298440.1Re-query CCDS DB by Nucleotide ID:ENST00000298440Re-query CCDS DB by Protein ID:ENSP00000298440
Original member Current member EBI ENST00000541038.2 ENSP00000437356.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000541038.2Link to Ensembl Protein Viewer:ENSP00000437356.2Re-query CCDS DB by Nucleotide ID:ENST00000541038Re-query CCDS DB by Protein ID:ENSP00000437356
Original member Current member EBI ENST00000543457.6 ENSP00000438800.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543457.6Link to Ensembl Protein Viewer:ENSP00000438800.1Re-query CCDS DB by Nucleotide ID:ENST00000543457Re-query CCDS DB by Protein ID:ENSP00000438800
Original member Current member EBI ENST00000541518.6 ENSP00000445269.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541518.6Link to Ensembl Protein Viewer:ENSP00000445269.2Re-query CCDS DB by Nucleotide ID:ENST00000541518Re-query CCDS DB by Protein ID:ENSP00000445269
Original member Current member NCBI NM_001346194.2 NP_001333123.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001346194.2Link to Protein Sequence:NP_001333123.1Re-query CCDS DB by Nucleotide ID:NM_001346194Re-query CCDS DB by Protein ID:NP_001333123Link to BLAST:NP_001333123.1
Original member Current member NCBI NM_001346195.2 NP_001333124.1 Accepted alive Link to Nucleotide Sequence:NM_001346195.2Link to Protein Sequence:NP_001333124.1Re-query CCDS DB by Nucleotide ID:NM_001346195Re-query CCDS DB by Protein ID:NP_001333124Link to BLAST:NP_001333124.1
Original member Current member NCBI NM_001346196.2 NP_001333125.1 Accepted alive Link to Nucleotide Sequence:NM_001346196.2Link to Protein Sequence:NP_001333125.1Re-query CCDS DB by Nucleotide ID:NM_001346196Re-query CCDS DB by Protein ID:NP_001333125Link to BLAST:NP_001333125.1
Original member Current member NCBI NM_001346197.2 NP_001333126.1 Accepted alive Link to Nucleotide Sequence:NM_001346197.2Link to Protein Sequence:NP_001333126.1Re-query CCDS DB by Nucleotide ID:NM_001346197Re-query CCDS DB by Protein ID:NP_001333126Link to BLAST:NP_001333126.1
Original member Current member NCBI NM_080818.5 NP_543008.3 Accepted alive Link to Nucleotide Sequence:NM_080818.5Link to Protein Sequence:NP_543008.3Re-query CCDS DB by Nucleotide ID:NM_080818Re-query CCDS DB by Protein ID:NP_543008Link to BLAST:NP_543008.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333123.1 337 Q96P68 337 100% 0 0
NP_001333124.1 337 Q96P68 337 100% 0 0
NP_001333125.1 337 Q96P68 337 100% 0 0
NP_001333126.1 337 Q96P68 337 100% 0 0
NP_543008.3 337 Q96P68 337 100% 0 0

Chromosomal Locations for CCDS 9482.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 96986746 96987759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGAATGAGCCACTAGACTATTTAGCAAATGCTTCTGATTTCCCCGATTATGCAGCTGCTTTTGGAAATT
GCACTGATGAAAACATCCCACTCAAGATGCACTACCTCCCTGTTATTTATGGCATTATCTTCCTCGTGGG
ATTTCCAGGCAATGCAGTAGTGATATCCACTTACATTTTCAAAATGAGACCTTGGAAGAGCAGCACCATC
ATTATGCTGAACCTGGCCTGCACAGATCTGCTGTATCTGACCAGCCTCCCCTTCCTGATTCACTACTATG
CCAGTGGCGAAAACTGGATCTTTGGAGATTTCATGTGTAAGTTTATCCGCTTCAGCTTCCATTTCAACCT
GTATAGCAGCATCCTCTTCCTCACCTGTTTCAGCATCTTCCGCTACTGTGTGATCATTCACCCAATGAGC
TGCTTTTCCATTCACAAAACTCGATGTGCAGTTGTAGCCTGTGCTGTGGTGTGGATCATTTCACTGGTAG
CTGTCATTCCGATGACCTTCTTGATCACATCAACCAACAGGACCAACAGATCAGCCTGTCTCGACCTCAC
CAGTTCGGATGAACTCAATACTATTAAGTGGTACAACCTGATTTTGACTGCAACTACTTTCTGCCTCCCC
TTGGTGATAGTGACACTTTGCTATACCACGATTATCCACACTCTGACCCATGGACTGCAAACTGACAGCT
GCCTTAAGCAGAAAGCACGAAGGCTAACCATTCTGCTACTCCTTGCATTTTACGTATGTTTTTTACCCTT
CCATATCTTGAGGGTCATTCGGATCGAATCTCGCCTGCTTTCAATCAGTTGTTCCATTGAGAATCAGATC
CATGAAGCTTACATCGTTTCTAGACCATTAGCTGCTCTGAACACCTTTGGTAACCTGTTACTATATGTGG
TGGTCAGCGACAACTTTCAGCAGGCTGTCTGCTCAACAGTGAGATGCAAAGTAAGCGGGAACCTTGAGCA
AGCAAAGAAAATTAGTTACTCAAACAACCCTTGA

Translation (337 aa):
MNEPLDYLANASDFPDYAAAFGNCTDENIPLKMHYLPVIYGIIFLVGFPGNAVVISTYIFKMRPWKSSTI
IMLNLACTDLLYLTSLPFLIHYYASGENWIFGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIHPMS
CFSIHKTRCAVVACAVVWIISLVAVIPMTFLITSTNRTNRSACLDLTSSDELNTIKWYNLILTATTFCLP
LVIVTLCYTTIIHTLTHGLQTDSCLKQKARRLTILLLLAFYVCFLPFHILRVIRIESRLLSISCSIENQI
HEAYIVSRPLAALNTFGNLLLYVVVSDNFQQAVCSTVRCKVSGNLEQAKKISYSNNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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