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Report for CCDS12741.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12741.1 Public Homo sapiens 19 DHDH 24 110 108 CCDS HistoryNCBI Gene:27294Re-query CCDS DB by CCDS ID:12741.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12741.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221403.7 ENSP00000221403.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221403.7Link to Ensembl Protein Viewer:ENSP00000221403.2Re-query CCDS DB by Nucleotide ID:ENST00000221403Re-query CCDS DB by Protein ID:ENSP00000221403
Original member Current member NCBI NM_014475.4 NP_055290.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014475.4Link to Protein Sequence:NP_055290.1Re-query CCDS DB by Nucleotide ID:NM_014475Re-query CCDS DB by Protein ID:NP_055290Link to BLAST:NP_055290.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055290.1 334 Q9UQ10 334 100% 0 0

Chromosomal Locations for CCDS 12741.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48933722 48933811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48935000 48935111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48936032 48936195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48939449 48939701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48942440 48942564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48944357 48944507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48944824 48944933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1005 nt):
ATGGCGCTGCGCTGGGGCATCGTGTCTGTCGGCCTCATCTCCAGCGACTTCACAGCCGTGCTGCAGACGC
TGCCTCGCTCTGAGCACCAGGTGGTGGCGGTGGCGGCCCGCGATCTGAGCCGTGCGAAGGAGTTTGCACA
GAAACACGACATCCCCAAGGCCTACGGCTCCTATGAGGAGCTGGCCAAGGACCCGAGCGTGGAGGTGGCC
TACATTGGCACCCAGCACCCCCAGCACAAGGCGGCGGTGATGCTGTGCTTGGCGGCGGGCAAGGCCGTTC
TGTGCGAGAAGCCCACGGGCGTGAACGCGGCGGAAGTTCGCGAGATGGTCGCGGAGGCCCGATCCCGAGC
CCTCTTCCTTATGGAGGCCATCTGGACCCGCTTCTTTCCTGCCTCCGAGGCTCTGAGGTCTGTTTTGGCC
CAGGGAACTCTAGGAGACCTCCGGGTGGCTCGGGCAGAATTTGGGAAGAATCTCATCCACGTTCCCCGGG
CCGTAGACCGGGCCCAGGCTGGGGGGGCCCTGCTGGACATCGGCATCTACTGTGTCCAGTTCACCTCCAT
GGTCTTTGGAGGGCAGAAGCCAGAGAAGATTTCTGTCGTGGGAAGGCGTCATGAAACAGGTGTGGATGAC
ACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAGCATCACCGTGCAGC
TCTCCAACACGGCCTCCGTGAGCGGCACCAAGGGCATGGTACAGCTCCTCAACCCCTGCTGGTGCCCGAC
CGAGCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGACTGCAATTTTGAC
AACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGCCTACGCAAGGGTATGAAGGAAAGTC
CTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACATCCTTGAAGAGGTGAGGAAGGCCATTGGAGT
CACCTTCCCCCAAGACAAACGCTGA

Translation (334 aa):
MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPSVEVA
YIGTQHPQHKAAVMLCLAAGKAVLCEKPTGVNAAEVREMVAEARSRALFLMEAIWTRFFPASEALRSVLA
QGTLGDLRVARAEFGKNLIHVPRAVDRAQAGGALLDIGIYCVQFTSMVFGGQKPEKISVVGRRHETGVDD
TVTVLLQYPGEVHGSFTCSITVQLSNTASVSGTKGMVQLLNPCWCPTELVVKGEHKEFPLPPVPKDCNFD
NGAGMSYEAKHVWECLRKGMKESPVIPLSESELLADILEEVRKAIGVTFPQDKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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