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Report for CCDS14036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14036.1 Public Homo sapiens 22 RRP7A 24 110 108 CCDS HistoryNCBI Gene:27341Re-query CCDS DB by CCDS ID:14036.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323013.7 ENSP00000321449.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323013.7Link to Ensembl Protein Viewer:ENSP00000321449.6Re-query CCDS DB by Nucleotide ID:ENST00000323013Re-query CCDS DB by Protein ID:ENSP00000321449
Original member Current member NCBI NM_015703.5 NP_056518.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015703.5Link to Protein Sequence:NP_056518.2Re-query CCDS DB by Nucleotide ID:NM_015703Re-query CCDS DB by Protein ID:NP_056518Link to BLAST:NP_056518.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056518.2 280 Q9Y3A4 280 100% 0 0

Chromosomal Locations for CCDS 14036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 42512910 42512995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42514106 42514304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42514682 42514779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42515151 42515268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42516011 42516136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42518005 42518147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42519714 42519786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (843 nt):
ATGGTGGCGCGCAGGAGGAAGTGCGCCGCGCGGGACCCGGAGGACCGTATCCCCAGCCCACTGGGCTACG
CAGCTATTCCAATCAAGTTCTCTGAAAAGCAACAGGCTTCTCACTACCTCTATGTGAGAGCACACGGCGT
TCGACAAGGCACCAAGTCCACCTGGCCTCAGAAGAGGACTCTTTTTGTCCTCAATGTGCCCCCATACTGC
ACAGAGGAGAGCCTGTCCCGCCTCCTGTCCACCTGTGGCCTCGTCCAGTCTGTAGAGTTGCAGGAGAAGC
CGGACCTGGCTGAGAGCCCAAAGGAGTCAAGGTCGAAGTTTTTTCATCCCAAGCCAGTTCCGGGTTTCCA
GGTAGCCTATGTGGTGTTCCAGAAGCCAAGTGGGGTGTCAGCGGCCTTGGCCCTGAAGGGCCCCCTGCTG
GTGTCCACAGAGAGCCACCCTGTGAAGAGTGGCATTCACAAGTGGATCAGTGACTACGCAGACTCTGTGC
CCGACCCTGAGGCCCTGAGGGTGGAAGTGGACACGTTCATGGAGGCATATGACCAGAAGATCGCTGAGGA
AGAAGCTAAGGCCAAGGAGGAGGAGGGGGTCCCTGACGAGGAGGGCTGGGTGAAGGTGACCCGCCGGGGC
CGGCGGCCTGTGCTCCCCCGGACTGAGGCAGCCAGCTTGCGGGTGCTGGAGAGGGAGAGACGGAAGCGCA
GCCGAAAAGAGCTGCTCAACTTCTACGCCTGGCAGCATCGAGAGAGCAAGATGGAGCATCTAGCGCAGCT
GCGCAAGAAGTTCGAGGAGGACAAGCAGAGGATCGAGCTGCTGCGGGCCCAGCGCAAATTCCGACCGTAC
TGA

Translation (280 aa):
MVARRRKCAARDPEDRIPSPLGYAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYC
TEESLSRLLSTCGLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLL
VSTESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDEEGWVKVTRRG
RRPVLPRTEAASLRVLERERRKRSRKELLNFYAWQHRESKMEHLAQLRKKFEEDKQRIELLRAQRKFRPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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