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Report for CCDS6391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6391.1 Public Homo sapiens 8 GML 24 110 108 CCDS HistoryNCBI Gene:2765Re-query CCDS DB by CCDS ID:6391.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000220940.2 ENSP00000220940.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000220940.2Link to Ensembl Protein Viewer:ENSP00000220940.1Re-query CCDS DB by Nucleotide ID:ENST00000220940Re-query CCDS DB by Protein ID:ENSP00000220940
Original member Current member NCBI NM_002066.3 NP_002057.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002066.3Link to Protein Sequence:NP_002057.1Re-query CCDS DB by Nucleotide ID:NM_002066Re-query CCDS DB by Protein ID:NP_002057Link to BLAST:NP_002057.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002057.1 158 Q99445 158 100% 0 0

Chromosomal Locations for CCDS 6391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 142840438 142840510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 142841118 142841225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 142846395 142846690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (477 nt):
ATGCTCCTCTTTGCCTTACTCCTAGCCATGGAGCTCCCATTGGTGGCAGCCAGTGCCACCATGCGCGCTC
AGTGGACTTACAGTTTGAGATGCCATGACTGTGCGGTCATAAATGACTTCAACTGTCCCAACATTAGAGT
ATGTCCGTATCATATTAGGCGCTGTATGACAATCTCCATTCGCATAAATTCTCGTGAACTACTTGTTTAT
AAGAACTGTACAAACAACTGCACATTTGTATATGCAGCTGAACAGCCTCCTGAAGCCCCAGGAAAAATCT
TCAAAACTAATAGCTTCTACTGGGTTTGTTGTTGTAATAGCATGGTTTGCAATGCAGGAGGACCTACTAA
TCTTGAAAGGGACATGTTACCCGATGAAGTAACTGAGGAGGAGCTTCCAGAAGGAACTGTGAGGCTGGGG
GTATCAAAACTGTTGCTGAGTTTTGCCTCTATCATAGTCAGCAATATATTGCCATGA

Translation (158 aa):
MLLFALLLAMELPLVAASATMRAQWTYSLRCHDCAVINDFNCPNIRVCPYHIRRCMTISIRINSRELLVY
KNCTNNCTFVYAAEQPPEAPGKIFKTNSFYWVCCCNSMVCNAGGPTNLERDMLPDEVTEEELPEGTVRLG
VSKLLLSFASIIVSNILP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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