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Report for CCDS803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
803.1 Public Homo sapiens 1 GNAT2 24 110 108 CCDS HistoryNCBI Gene:2780Re-query CCDS DB by CCDS ID:803.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 803.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000351050.8 ENSP00000251337.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000351050.8Link to Ensembl Protein Viewer:ENSP00000251337.3Re-query CCDS DB by Nucleotide ID:ENST00000351050Re-query CCDS DB by Protein ID:ENSP00000251337
Original member Current member EBI ENST00000679935.1 ENSP00000505083.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000679935.1Link to Ensembl Protein Viewer:ENSP00000505083.1Re-query CCDS DB by Nucleotide ID:ENST00000679935Re-query CCDS DB by Protein ID:ENSP00000505083
Original member Current member NCBI NM_001377295.2 NP_001364224.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001377295.2Link to Protein Sequence:NP_001364224.1Re-query CCDS DB by Nucleotide ID:NM_001377295Re-query CCDS DB by Protein ID:NP_001364224Link to BLAST:NP_001364224.1
Original member Current member NCBI NM_001379232.1 NP_001366161.1 Accepted alive Link to Nucleotide Sequence:NM_001379232.1Link to Protein Sequence:NP_001366161.1Re-query CCDS DB by Nucleotide ID:NM_001379232Re-query CCDS DB by Protein ID:NP_001366161Link to BLAST:NP_001366161.1
Original member Current member NCBI NM_005272.5 NP_005263.1 Accepted alive Link to Nucleotide Sequence:NM_005272.5Link to Protein Sequence:NP_005263.1Re-query CCDS DB by Nucleotide ID:NM_005272Re-query CCDS DB by Protein ID:NP_005263Link to BLAST:NP_005263.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001364224.1 354 P19087 354 100% 0 0
NP_001366161.1 354 P19087 354 100% 0 0
NP_005263.1 354 P19087 354 100% 0 0

Chromosomal Locations for CCDS 803.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109603354 109603544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109603951 109604104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109605970 109606099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109606308 109606436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109608631 109608788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109610040 109610181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109610465 109610507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109612753 109612870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGGAAGTGGAGCCAGTGCTGAGGACAAAGAACTGGCCAAGAGGTCCAAGGAGCTAGAAAAGAAGCTGC
AGGAGGATGCTGATAAGGAAGCCAAGACTGTCAAGCTGCTACTGCTGGGTGCTGGGGAGTCAGGAAAGAG
CACCATCGTCAAACAGATGAAGATCATTCACCAGGATGGCTATTCACCAGAAGAATGCCTGGAGTTCAAG
GCTATCATCTATGGAAATGTGCTGCAGTCCATCCTGGCTATCATCCGGGCCATGACCACACTGGGCATCG
ATTATGCTGAACCAAGCTGTGCGGATGACGGGCGACAGCTCAACAACCTGGCTGACTCCATTGAGGAGGG
AACCATGCCTCCTGAGCTCGTGGAGGTCATTAGGAGGTTGTGGAAGGATGGTGGGGTGCAAGCCTGCTTC
GAGAGAGCTGCAGAATACCAGCTTAATGACTCCGCATCTTACTACCTGAACCAATTAGAACGAATTACAG
ACCCTGAGTACCTCCCTAGTGAGCAAGATGTGCTCCGATCCAGAGTCAAAACCACGGGCATCATTGAAAC
CAAGTTTTCCGTCAAAGACTTGAATTTCAGGATGTTTGATGTGGGAGGGCAGAGATCCGAGAGAAAGAAG
TGGATCCACTGCTTCGAGGGAGTCACCTGCATCATTTTCTGTGCAGCCCTCAGTGCCTATGATATGGTGC
TGGTGGAAGATGACGAAGTGAATCGTATGCATGAGTCTTTGCATCTGTTCAACAGCATATGTAACCACAA
ATTCTTTGCGGCTACTTCCATTGTCCTCTTTCTCAACAAGAAGGACCTCTTTGAGGAAAAAATCAAGAAA
GTCCATCTCAGCATTTGTTTTCCAGAGTATGATGGTAACAACTCCTATGATGATGCGGGGAATTACATAA
AGAGCCAGTTCCTTGACCTCAATATGCGAAAAGATGTCAAAGAAATCTACAGTCACATGACCTGTGCTAC
AGATACACAGAATGTCAAATTTGTGTTTGATGCAGTTACAGATATTATCATCAAAGAAAACCTCAAGGAC
TGCGGCCTCTTCTAA

Translation (354 aa):
MGSGASAEDKELAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYSPEECLEFK
AIIYGNVLQSILAIIRAMTTLGIDYAEPSCADDGRQLNNLADSIEEGTMPPELVEVIRRLWKDGGVQACF
ERAAEYQLNDSASYYLNQLERITDPEYLPSEQDVLRSRVKTTGIIETKFSVKDLNFRMFDVGGQRSERKK
WIHCFEGVTCIIFCAALSAYDMVLVEDDEVNRMHESLHLFNSICNHKFFAATSIVLFLNKKDLFEEKIKK
VHLSICFPEYDGNNSYDDAGNYIKSQFLDLNMRKDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKD
CGLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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