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Report for CCDS56096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56096.1 Public Homo sapiens 19 PPP1R37 24 110 108 CCDS HistoryNCBI Gene:284352Re-query CCDS DB by CCDS ID:56096.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56096.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221462.9 ENSP00000221462.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221462.9Link to Ensembl Protein Viewer:ENSP00000221462.3Re-query CCDS DB by Nucleotide ID:ENST00000221462Re-query CCDS DB by Protein ID:ENSP00000221462
Original member Current member NCBI NM_019121.2 NP_061994.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019121.2Link to Protein Sequence:NP_061994.1Re-query CCDS DB by Nucleotide ID:NM_019121Re-query CCDS DB by Protein ID:NP_061994Link to BLAST:NP_061994.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061994.1 691 O75864-1 691 100% 0 0

Chromosomal Locations for CCDS 56096.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45093326 45093527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45138514 45138611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45140236 45140281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45140506 45140606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45141322 45141441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45142061 45142211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45142303 45142458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45143521 45143633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45144854 45144995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45145094 45145260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45145353 45146049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45146390 45146472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2076 nt):
ATGGAGATCGCGCCGCAGGAGGCGCCGCCCGTGCCGGGCGCGGACGGCGACATTGAAGAGGCCCCAGCTG
AG
GCCGGGTCTCCCAGCCCCGCGTCGCCCCCCGCCGATGGGCGCCTCAAGGCTGCAGCCAAGCGCGTCAC
A
TTCCCGTCCGACGAGGATATCGTGTCTGGAGCAGTGGAGCCCAAAGACCCCTGGAGACATGCCCAGAAT
GTG
ACCGTGGACGAGGTCATCGGCGCCTACAAGCAGGCCTGCCAGAAGCTGAACTGCAGGCAGATCCCCA
AG
CTCCTCAGGCAGCTGCAGGAATTCACAGACCTCGGGCACCGCCTCGACTGTCTGGACCTGAAAGGTGA
G
AAGCTTGACTACAAGACCTGTGAGGCCCTGGAAGAGGTCTTCAAGAGGCTGCAGTTCAAGGTCGTGGAC
CTG
GAGCAGACAAACCTGGATGAAGATGGTGCCTCGGCCCTCTTCGACATGATCGAGTACTACGAGTCGG
CC
ACCCACCTCAACATCTCCTTCAACAAGCACATCGGCACCCGGGGCTGGCAGGCGGCCGCCCACATGAT
G
CGCAAGACGAGCTGCCTGCAGTATCTGGACGCCCGCAACACGCCCCTGCTGGACCACTCGGCGCCCTTC
GTG
GCCCGTGCCCTGCGCATCCGCAGCAGCCTGGCAGTGCTGCACTTGGAGAACGCCAGCCTGTCGGGGC
GG
CCCCTCATGCTGCTCGCCACGGCCCTGAAGATGAACATGAACCTGCGGGAGCTGTACCTGGCGGACAA
C
AAGCTCAACGGCCTGCAGGACTCGGCCCAGCTGGGTAACCTGCTCAAGTTCAACTGCTCCCTGCAGATC
CTG
GACCTCCGGAACAACCACGTGCTAGACTCGGGTCTGGCCTACATCTGCGAGGGCCTCAAGGAGCAGA
GG
AAGGGGCTGGTGACCCTGGTGCTGTGGAACAACCAGCTCACGCACACAGGCATGGCCTTCCTGGGCAT
G
ACACTGCCGCACACTCAGAGCCTGGAGACGCTGAACCTGGGCCACAACCCCATCGGGAACGAGGGTGTG
CGG
CACCTCAAGAACGGGCTCATCAGCAACCGCAGCGTGCTGCGCCTCGGGCTGGCCTCCACCAAGCTCA
CG
TGCGAGGGCGCGGTGGCGGTGGCGGAGTTCATCGCTGAGAGCCCCCGCCTCCTGAGACTGGACCTTCG
G
GAGAACGAGATCAAGACAGGCGGGCTCATGGCACTGTCGTTGGCCCTCAAGGTGAACCACTCACTGCTG
CGC
CTGGACCTCGACCGTGAACCCAAGAAAGAGGCGGTGAAGAGCTTCATCGAGACGCAGAAGGCGCTGC
TG
GCCGAGATCCAGAACGGCTGCAAGCGCAACTTGGTGCTGGCGCGGGAGAGGGAGGAGAAGGAGCAGCC
G
CCACAGCTGTCGGCCTCCATGCCTGAGACCACCGCCACCGAGCCCCAGCCCGACGACGAGCCCGCCGCT
GGG
GTGCAGAACGGGGCCCCCAGCCCCGCACCCAGCCCGGACTCAGACTCAGACTCGGACTCGGATGGGG
AG
GAAGAGGAGGAAGAGGAAGGGGAGAGGGACGAGACCCCCTGTCCTGCCCTGGTGCCCCCCACGGACTC
C
CTGGGCCCTGGGGACAGGAGTCCCCCAGGCAGCCCCTCCACACCCACCGAGCAGCGGATTTCCGTGTCC
AGC
CCGGGCCGGGGCCACAAGGTGTTTGTGGTGACCCGGGTGGAGAGCCCGCCCGAGAGGGCAGAGCCCC
CT
GCGTCCCCCACCCCTCCCTCTCCCCCACCCCCTCCCTCCCCACCCGCCTCACCTTCCCTACCACCAGC
C
GGGGCCATTGACACCCGGGACACAGGGTCCTCTGAGCCTCAGCCACCACCGGAGCCGCCTCGGTCAGGG
CCA
CCACTGCCCAACGGCCTGAAGCCCGAGTTCGCCCTGGCACTGCCCCCTGAGCCGCCCCCGGGGCCTG
AG
GTCAAGGGGGGCAGCTGCGGCCTGGAGCACGAACTGAGCTGCTCCAAGAACGAGAAGGAGCTCGAGGA
G
CTGCTTCTGGAAGCCAGTCAGGAATCCGGGCAGGAGACACTGTGA


Translation (691 aa):
MEIAPQEAPPVPGADGDIEEAPAEAGSPSPASPPADGRLKAAAKRVTFPSDEDIVSGAVEPKDPWRHAQN
V
TVDEVIGAYKQACQKLNCRQIPKLLRQLQ
EFTDLGHRLDCLDLKGEKLDYKTCEALEEVFKRLQFKVVD
L
EQTNLDED
GASALFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDHSAPF
V
ARALRIRSSLAVLHLENASLSGRPLMLL
ATALKMNMNLRELYLADNKLNGLQDSAQLGNLLKFNCSLQI
L
DLRNNHVLDS
GLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGV
R
HLKNGLISNRSVLRLGLASTKLTCE
GAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALKVNHSLL
R
LDLDREPKKEA
VKSFIETQKALLAEIQNGCKRNLVLAREREEKEQPPQLSASMPETTATEPQPDDEPAA
G
VQNGAPSPAPSPDSDSDSDSDGEEEEEEEGERDETPCPALVPPTDSLGPGDRSPPGSPSTPTEQRISVS
S
PGRGHKVFVVTRVESPPERAEPPASPTPPSPPPPPSPPASPSLPPAGAIDTRDTGSSEPQPPPEPPRSG
P
PLPNGLKPEFALALPPEPPPGPEVKGGSCGLEH
ELSCSKNEKELEELLLEASQESGQETL



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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