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Report for CCDS12732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12732.1 Public Homo sapiens 19 IZUMO1 24 110 108 CCDS HistoryNCBI Gene:284359Re-query CCDS DB by CCDS ID:12732.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332955.7 ENSP00000327786.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332955.7Link to Ensembl Protein Viewer:ENSP00000327786.2Re-query CCDS DB by Nucleotide ID:ENST00000332955Re-query CCDS DB by Protein ID:ENSP00000327786
Original member Current member NCBI NM_182575.3 NP_872381.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182575.3Link to Protein Sequence:NP_872381.2Re-query CCDS DB by Nucleotide ID:NM_182575Re-query CCDS DB by Protein ID:NP_872381Link to BLAST:NP_872381.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872381.2 350 Q8IYV9-1 350 100% 0 0

Chromosomal Locations for CCDS 12732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48740908 48741028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48741301 48741478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48741789 48741942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48742209 48742309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48743445 48743525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48744175 48744195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48744453 48744539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48745214 48745288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48745625 48745859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGGGGCCGCATTTTACCCTCCTGTGTGCGGCGCTGGCCGGTTGCTTGCTTCCTGCCGAGGGGTGTGTTA
TATGTGACCCGTCTGTCGTGCTGGCGCTAAAGTCCCTGGAGAAAGATTACCTGCCTGGCCACCTGGATGC
GAAGCATCACAAAGCCATGATGGAAAGGGTAGAGAATGCCGTGAAGGATTTCCAGGAACTGTCGCTTAAT
GAGGATGCCTATATGGGGGTCGTTGATGAGGCCACACTGCAAAAGGGGTCCTGGAGTTTGCTGAAGGATC
TGAAACGCATCACAGACAGTGATGTAAAAGGCGATCTCTTCGTGAAGGAGCTATTTTGGATGTTGCACTT
GCAAAAGGAAACCTTTGCCACCTATGTTGCTCGATTCCAAAAAGAGGCTTATTGTCCCAACAAATGTGGT
GTGATGTTGCAAACTCTGATCTGGTGCAAGAACTGCAAAAAGGAGGTTCACGCTTGTCGAAAGTCCTACG
ATTGCGGGGAGCGGAATGTGGAAGTTCCTCAAATGGAAGACATGATCCTGGACTGTGAGTTAAACTGGCA
TCAGGCTTCGGAAGGCCTCACTGATTACAGCTTTTACAGGGTTTGGGGGAACAATACGGAGACCTTGGTG
TCCAAGGGGAAAGAGGCCACCCTGACCAAGCCCATGGTGGGTCCAGAGGATGCAGGCAGCTACCGCTGCG
AGCTGGGCTCTGTGAATTCCAGCCCAGCCACGATCATCAATTTTCACGTCACAGTGTTGCCCAAAATGAT
CAAGGAGGAAAAACCTTCTCCAAATATCGTAACCCCGGGGGAGGCGACCACGGAGTCGTCCATAAGCCTC
CAGCCTCTGCAGCCCGAGAAAATGCTGGCAAGCCGCCTTCTGGGGCTGCTGATCTGCGGCTCCCTAGCAC
TGATAACCGGCCTTACCTTTGCGATATTTCGTCGAAGGAAGGTGATCGATTTCATCAAATCCTCACTGTT
TGGCCTTGGCAGTGGAGCGGCCGAGCAAACCCAGGTCCCAAAAGAAAAGGCCACAGATTCGAGGCAACAA
TAA

Translation (350 aa):
MGPHFTLLCAALAGCLLPAEGCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENAVKDFQELSLN
EDAYMGVVDEATLQKGSWSLLKDLKRITDSDVKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCG
VMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMILDCELNWHQASEGLTDYSFYRVWGNNTETLV
SKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKMIKEEKPSPNIVTPGEATTESSISL
QPLQPEKMLASRLLGLLICGSLALITGLTFAIFRRRKVIDFIKSSLFGLGSGAAEQTQVPKEKATDSRQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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