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Report for CCDS5744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5744.1 Public Homo sapiens 7 GPR22 24 110 108 CCDS HistoryNCBI Gene:2845Re-query CCDS DB by CCDS ID:5744.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5744.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304402.6 ENSP00000302676.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304402.6Link to Ensembl Protein Viewer:ENSP00000302676.4Re-query CCDS DB by Nucleotide ID:ENST00000304402Re-query CCDS DB by Protein ID:ENSP00000302676
Original member Current member NCBI NM_005295.3 NP_005286.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005295.3Link to Protein Sequence:NP_005286.2Re-query CCDS DB by Nucleotide ID:NM_005295Re-query CCDS DB by Protein ID:NP_005286Link to BLAST:NP_005286.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005286.2 433 Q99680 433 100% 0 0

Chromosomal Locations for CCDS 5744.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107474061 107475362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1302 nt):
ATGTGTTTTTCTCCCATTCTGGAAATCAACATGCAGTCTGAATCTAACATTACAGTGCGAGATGACATTG
ATGACATCAACACCAATATGTACCAACCACTATCATATCCGTTAAGCTTTCAAGTGTCTCTCACCGGATT
TCTTATGTTAGAAATTGTGTTGGGACTTGGCAGCAACCTCACTGTATTGGTACTTTACTGCATGAAATCC
AACTTAATCAACTCTGTCAGTAACATTATTACAATGAATCTTCATGTACTTGATGTAATAATTTGTGTGG
GATGTATTCCTCTAACTATAGTTATCCTTCTGCTTTCACTGGAGAGTAACACTGCTCTCATTTGCTGTTT
CCATGAGGCTTGTGTATCTTTTGCAAGTGTCTCAACAGCAATCAACGTTTTTGCTATCACTTTGGACAGA
TATGACATCTCTGTAAAACCTGCAAACCGAATTCTGACAATGGGCAGAGCTGTAATGTTAATGATATCCA
TTTGGATTTTTTCTTTTTTCTCTTTCCTGATTCCTTTTATTGAGGTAAATTTTTTCAGTCTTCAAAGTGG
AAATACCTGGGAAAACAAGACACTTTTATGTGTCAGTACAAATGAATACTACACTGAACTGGGAATGTAT
TATCACCTGTTAGTACAGATCCCAATATTCTTTTTCACTGTTGTAGTAATGTTAATCACATACACCAAAA
TACTTCAGGCTCTTAATATTCGAATAGGCACAAGATTTTCAACAGGGCAGAAGAAGAAAGCAAGAAAGAA
AAAGACAATTTCTCTAACCACACAACATGAGGCTACAGACATGTCACAAAGCAGTGGTGGGAGAAATGTA
GTCTTTGGTGTAAGAACTTCAGTTTCTGTAATAATTGCCCTCCGGCGAGCTGTGAAACGACACCGTGAAC
GACGAGAAAGACAAAAGAGAGTCTTCAGGATGTCTTTATTGATTATTTCTACATTTCTTCTCTGCTGGAC
ACCAATTTCTGTTTTAAATACCACCATTTTATGTTTAGGCCCAAGTGACCTTTTAGTAAAATTAAGATTG
TGTTTTTTAGTCATGGCTTATGGAACAACTATATTTCACCCTCTATTATATGCATTCACTAGACAAAAAT
TTCAAAAGGTCTTGAAAAGTAAAATGAAAAAGCGAGTTGTTTCTATAGTAGAAGCTGATCCCCTGCCTAA
TAATGCTGTAATACACAACTCTTGGATAGATCCTAAAAGAAACAAAAAAATTACCTTTGAAGATAGTGAA
ATAAGAGAAAAATGTTTAGTGCCTCAGGTTGTCACAGACTAG

Translation (433 aa):
MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKS
NLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTAINVFAITLDR
YDISVKPANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTWENKTLLCVSTNEYYTELGMY
YHLLVQIPIFFFTVVVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHEATDMSQSSGGRNV
VFGVRTSVSVIIALRRAVKRHRERRERQKRVFRMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRL
CFLVMAYGTTIFHPLLYAFTRQKFQKVLKSKMKKRVVSIVEADPLPNNAVIHNSWIDPKRNKKITFEDSE
IREKCLVPQVVTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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