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Report for CCDS30786.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30786.2 Public Homo sapiens 1 EEIG2 24 110 108 CCDS HistoryNCBI Gene:284611Re-query CCDS DB by CCDS ID:30786.2See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 30786.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370035.8 ENSP00000359052.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370035.8Link to Ensembl Protein Viewer:ENSP00000359052.3Re-query CCDS DB by Nucleotide ID:ENST00000370035Re-query CCDS DB by Protein ID:ENSP00000359052
Original member Current member NCBI NM_001010883.3 NP_001010883.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010883.3Link to Protein Sequence:NP_001010883.2Re-query CCDS DB by Nucleotide ID:NM_001010883Re-query CCDS DB by Protein ID:NP_001010883Link to BLAST:NP_001010883.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010883.2 360 Q5T8I3-1 360 100% 0 0

Chromosomal Locations for CCDS 30786.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108560429 108560565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108600566 108600686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108606223 108606252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108612178 108612294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108616382 108616428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108624645 108624748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108628167 108628262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108628395 108628584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108628677 108628804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108629588 108629657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108635108 108635150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGATGAAGAAGAAGAAGTTTAAGTTTAAGGTGGACTTCGAGCTCGAGGAGCTCTCCTCAGTGCCCTTCG
TCAATGGGGTCCTCTTCTGCAAGATGCGGCTGCTGGACGGCGGCAGCTTCACCGCCGAGTCCTCCAGGGA
GGTGGTACAAGCAAACTGTGTTCGCTGGAGAAAGAAGTTCTCATTTATGTGCAAAATGAGTGCAAGTGCT
GCCACAGGCATCCTAGATCCTTGTATCTACAGAGTATCCGTGAGGAAGGAATTAAAAGGTGGAAAAGCTT
ATGCAAAGCTGGGCTTTGCAGATCTAAACCTGGCAGAGTTTGCTGGATCAGGAAATACCACTCGCCGCTG
TTTACTGGAAGGCTATGATACCAAAAATACAAGACAGGATAATTCCATTCTTAAAGTTTTGATCAGTATG
CAACTGATGTCTGGTGACCCATGTTTTAAAACGCCTCCCTCCACTTCAATGTCTATACCAATTGCTGGTG
AATCTGAATCTTTGCAAGAAGATAGAAAAGGTGGAGAGACTCTCAAAGTGCATCTTGGAATAGCAGATCT
TTCAGCAAAGAGTGCCTCTGTTCCAGACGAACTTGGTGCCTGTGGACATTCTAGAACATCAAGCTATGCA
AGTCAGCAGTCAAAAGTATCAGGGTATAGCACGTGTCACTCCCGGTCATCTAGTTTCTCTGAGCTCTGCC
ACAGGAGAAATACCTCAGTGGGAAGCACATCAACAGGAGTTGAAAGTATTCTAGAGCCATGTGATGAAAT
TGAGCAGAAAATCGCTGAGCCAAATCTTGATACAGCTGATAAAGAAGATACAGCTTCAGAAAAACTCAGC
AGATGCCCAGTGAAACAAGATTCTGTAGAATCTCAGCTGAAGCGAGTTGATGACACCAGGGTGGATGCAG
ATGACATTGTAGAGAAAATATTACAAAGTCAAGACTTCAGCCTAGATTCCAGTGCGGAAGAAGAAGGACT
AAGGCTATTTGTGGGTCCTGGGGGAAGTACAACCTTTGGCAGTCATCATCTTCCAAATAGGGTGGGGTCT
GGAGCTTATGAACAAGTTGTGATCAAACGCTAG

Translation (360 aa):
MMKKKKFKFKVDFELEELSSVPFVNGVLFCKMRLLDGGSFTAESSREVVQANCVRWRKKFSFMCKMSASA
ATGILDPCIYRVSVRKELKGGKAYAKLGFADLNLAEFAGSGNTTRRCLLEGYDTKNTRQDNSILKVLISM
QLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLKVHLGIADLSAKSASVPDELGACGHSRTSSYA
SQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLS
RCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAEEEGLRLFVGPGGSTTFGSHHLPNRVGS
GAYEQVVIKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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