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Report for CCDS34439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34439.1 Public Homo sapiens 6 BNIP5 24 110 108 CCDS HistoryNCBI Gene:389384Re-query CCDS DB by CCDS ID:34439.1Re-query CCDS DB by GeneID:389384See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34439.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437635.3 ENSP00000418983.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000437635.3Link to Ensembl Protein Viewer:ENSP00000418983.1Re-query CCDS DB by Nucleotide ID:ENST00000437635Re-query CCDS DB by Protein ID:ENSP00000418983
Original member Current member NCBI NM_001010903.5 NP_001010903.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010903.5Link to Protein Sequence:NP_001010903.3Re-query CCDS DB by Nucleotide ID:NM_001010903Re-query CCDS DB by Protein ID:NP_001010903Link to BLAST:NP_001010903.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010903.3 652 P0C671 652 100% 0 0

Chromosomal Locations for CCDS 34439.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 36317356 36317391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36319356 36319610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36321155 36321219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36322311 36322442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36323293 36323533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36324129 36324190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36325283 36325414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36326510 36326753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36327030 36327094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36328598 36328714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36330081 36330690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1959 nt):
ATGGAGAATCCAAGGTGCCCAAGGAGGCCCCTGGCGGAGAAGAAAGCCAGGTCTCTGGACAGGCCGCAGG
CCCCCGGGAAAGGCTCGGAGTCGTGGGACTGCCATTGGCTCTCCCTGCCCACTGCCCCCTCCAGGAAGGC
GCTTCACTGGACGACCAGTGATTGGGCCAGACATTCAGACAGCCCAGCTCCATCTGCAGAGGCTCACTGC
ACCACCGCTGCAGCCCCCACTCCCGAGGAGACCGGAGATTTTCTCCCCAGCGAGCAGAGGCCTTCGCAAG
ACACCAAGAAGGGGTGGCTGAAGACCATGCTGAACTTCTTCGTGAGGACGGGCCCTGAGGAGCCCAGAGA
AAAGGCCAGCAGGAGGCCAAGGGGGAAGGAGGGTATCTCCCAGCATCCGGAGCCCCTGGAAGCAGCAGGG
GAGCCAGCCCTCAGGAAGAAAGCCCACCACGACAAGAAGCCCAGCCGCAAGAAGCAAGGTCACAAGAAAC
ACGCGGCCGAGGTGACTAAGGCAGCTCAAGACCAGGAGGCCAGAGGCCGAGAGGAAGGGTTGTCCAAGGC
AGCTGCTGCCTTGCGCTCCGGGGAGGCTGACCTGGGCCCAGCTCGCAGGGGTGGGGAAGATTCTGATCAC
CAGTCCTTCCTCATCAAAGTGGATGGTACTGGAGCTTTGGATGTTTCTCCCCATGCCACAGGTCATCAGC
AAGAAGAGGAGCTCAAAAAGCCTGACCAGGATGCTATCATTCAGATGATAGTGGAATTGCTCAAAAGAGT
GGGAGACCAGTGGGAAGAAGAGCAATCTCTGGCCTCACAGCTGGGGGTGGCCCTGCCAAACCCAGCACCA
GCTGTTAGGAAGAAATCCCAAGAGAAAAAGACAAGCCTCAAGAGAACCTCAAAGACAAACCCCAAGAAAC
ACGGCTCCGAGGAGGCCAAGAGGGGGGCTGCAGATGTTTCCAGTCCAGAGGCCTGGCCACCCAAGAAGTC
CAGCTTTCTGCCCCTGTGTGTCAGCGGCCATCGGCCTTCCATCTCCAGCAGCTATGGCTTGGAAGAACCT
AAAGTCCAGGAGGCCCCATCTACAGAGGCTGGGGCTCCAGGTCCCTCCGTGCTTCCCACCCCATCAGAGA
GCCAGGAACCTGGAGAGGAGCTTCCGCTGGACAGAGCCTCGGAATACAAAGAATTCATTCAGAAGATCAT
TTCCATGCTCCAAGATGCAGAAGAACAGCAAGGAGAGGAGCAACCTCAAGTCCAGCAGGAAGAGGTGGGT
GTAGAAAACCCGGCCCCACACTGCAGAAGGAAATCTCAAGAAAAAAGGTCGAGCTTCAGGAGAGCGTTTT
ACCATAAGAAACACACCTCCAAGGAACCCAGAAGAGCGGGGGCAGCAGGGGCTGCCAGCCCAGAGGCCCG
ACGACCCAAGAGGCCCAGCTTTCTGCCCCTGTGTGTTGGTGGCCATCGGCCCTCCACCTCCAGCAGCCTT
GATCCAGAAGATCTCGAGTGCCGGGAGCCCCTGCCCGCAGAAGGGGAGCCAGTTGTGATCTCAGAAGCAC
CCTCCCAGGCTAGAGGCCACACGCCAGAAGGGGCACCTCAGCTGAGTGGAGCATGTGAATCTAAGGAGAT
CATCATCCAGAAGCTTGTGGCACTTCTCCAAGAAGTGGATGGCCAACTGGGGCAGCAGATCAGGCGCCAC
CCCAGCTTTAAGAGGTTTTTTTACGAGTTCTCGGACTCCTCCCTCAGCAAGCTGGTAGCCACCCTGCGCA
GCCAGGTGGCTCACTCCTCTAAGCTGGACAGGAACCGCGCCAGGAGACTCTACCAGTTTGACGTTAGCTT
AGCTAACAAATTTGCTGGCAGCAACAGCCATGCCATGTGCATCCTCATGGGCCTAAGAGACCACTACAAT
TGCACCCAGTTCCCATACAGGGAGGACCAGCCGAACATCACAAGTCCTAAGGTTGAAAGTCCAGATTGA

Translation (652 aa):
MENPRCPRRPLAEKKARSLDRPQAPGKGSESWDCHWLSLPTAPSRKALHWTTSDWARHSDSPAPSAEAHC
TTAAAPTPEETGDFLPSEQRPSQDTKKGWLKTMLNFFVRTGPEEPREKASRRPRGKEGISQHPEPLEAAG
EPALRKKAHHDKKPSRKKQGHKKHAAEVTKAAQDQEARGREEGLSKAAAALRSGEADLGPARRGGEDSDH
QSFLIKVDGTGALDVSPHATGHQQEEELKKPDQDAIIQMIVELLKRVGDQWEEEQSLASQLGVALPNPAP
AVRKKSQEKKTSLKRTSKTNPKKHGSEEAKRGAADVSSPEAWPPKKSSFLPLCVSGHRPSISSSYGLEEP
KVQEAPSTEAGAPGPSVLPTPSESQEPGEELPLDRASEYKEFIQKIISMLQDAEEQQGEEQPQVQQEEVG
VENPAPHCRRKSQEKRSSFRRAFYHKKHTSKEPRRAGAAGAASPEARRPKRPSFLPLCVGGHRPSTSSSL
DPEDLECREPLPAEGEPVVISEAPSQARGHTPEGAPQLSGACESKEIIIQKLVALLQEVDGQLGQQIRRH
PSFKRFFYEFSDSSLSKLVATLRSQVAHSSKLDRNRARRLYQFDVSLANKFAGSNSHAMCILMGLRDHYN
CTQFPYREDQPNITSPKVESPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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