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Report for CCDS5999.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5999.1 Public Homo sapiens 8 MICU3 24 110 108 CCDS HistoryNCBI Gene:286097Re-query CCDS DB by CCDS ID:5999.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5999.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318063.10 ENSP00000321455.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318063.10Link to Ensembl Protein Viewer:ENSP00000321455.5Re-query CCDS DB by Nucleotide ID:ENST00000318063Re-query CCDS DB by Protein ID:ENSP00000321455
Original member Current member NCBI NM_181723.3 NP_859074.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181723.3Link to Protein Sequence:NP_859074.1Re-query CCDS DB by Nucleotide ID:NM_181723Re-query CCDS DB by Protein ID:NP_859074Link to BLAST:NP_859074.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_859074.1 530 Q86XE3 530 100% 0 0

Chromosomal Locations for CCDS 5999.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 17027280 17027660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17064084 17064237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17069688 17069719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17077783 17077861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17081693 17081740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17085236 17085318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17086964 17087035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17090546 17090584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17098458 17098553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17104391 17104491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17105413 17105584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17114093 17114201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17116443 17116600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17118707 17118775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGGCTGCGCTGCGAAGGCTCTTGTGGCCGCCACCCCGGGTGTCTCCTCCACTCTGCGCTCACCAGCCCC
TCCTTGGGCCGTGGGGGCGGCCTGCGGTGACCACCCTGGGCCTTCCTGGCCGGCCCTTCTCCTCCCGAGA
GGATGAGGAGAGGGCTGTGGCGGAGGCGGCATGGAGGCGGCGGCGGCGCTGGGGGGAGCTGAGCGTGGCG
GCGGCGGCCGGCGGGGGGCTGGTCGGCCTGGTATGCTACCAGCTGTACGGGGACCCCAGGGCCGGCTCGC
CGGCGACCGGGCGACCCTCAAAGAGCGCGGCCACGGAGCCCGAGGACCCGCCCCGCGGCCGGGGGATGCT
GCCCATCCCAGTGGCGGCTGCCAAGGAGACGGTTGCTATTGGCAGAACAGACATTGAAGACTTAGACCTT
TATGCCACATCTCGGGAGAGGCGATTTCGTTTATTTGCTTCTATAGAATGTGAAGGGCAGTTATTCATGA
CTCCGTATGATTTTATTTTGGCTGTTACAACAGATGAGCCCAAAGTTGCCAAAACTTGGAAGTCACTTTC
CAAACAGGAATTAAATCAAATGCTCGCAGAAACACCACCAGTTTGGAAAGGCTCATCGAAGCTATTTCGA
AATCTTAAAGAAAAAGGTGTGATTTCTTACACAGAATATCTTTTTCTTTTATGTATTTTAACAAAGCCAC
ATGCAGGGTTCAGAATAGCTTTCAACATGTTTGACACTGATGGCAATGAGATGGTGGATAAAAAAGAGTT
TTTGGTGCTTCAAGAGATATTCAGGAAAAAAAATGAAAAGAGAGAAATTAAAGGAGATGAAGAAAAGCGT
GCAATGCTGCGTCTTCAACTTTATGGATACCATTCTCCTACTAATAGTGTACTTAAAACAGATGCTGAGG
AACTTGTCTCCAGAAGCTATTGGGATACACTGAGACGTAACACAAGCCAAGCACTGTTTTCAGACCTCGC
AGAGCGTGCTGATGACATCACAAGTTTAGTAACAGATACTACACTTCTTGTACACTTTTTTGGAAAGAAA
GGAAAAGCTGAGCTCAACTTTGAAGATTTTTATAGATTCATGGATAATCTCCAAACAGAAGTTCTAGAAA
TAGAATTCCTTTCCTACTCAAATGGAATGAATACCATCAGTGAAGAAGATTTTGCTCATATTCTTTTACG
ATATACAAATGTGGAAAATACATCAGTATTTTTAGAAAATGTGCGTTACAGTATACCTGAAGAAAAGGGC
ATCACATTTGATGAATTCAGGTCATTTTTCCAGTTTTTAAACAACCTAGAAGACTTTGCAATAGCCCTGA
ATATGTATAACTTTGCAAGTCGTTCTATAGGGCAAGATGAATTTAAACGTGCCGTCTATGTAGCTACTGG
ACTCAAATTTTCACCACATTTAGTGAACACTGTCTTCAAGATTTTTGATGTTGACAAAGATGATCAATTA
AGTTATAAAGAATTTATTGGAATTATGAAAGACAGACTCCATAGAGGATTCCGGGGTTATAAAACAGTCC
AGAAGTACCCCACTTTCAAATCCTGCCTGAAGAAAGAACTTCACAGCAGATAA

Translation (530 aa):
MAALRRLLWPPPRVSPPLCAHQPLLGPWGRPAVTTLGLPGRPFSSREDEERAVAEAAWRRRRRWGELSVA
AAAGGGLVGLVCYQLYGDPRAGSPATGRPSKSAATEPEDPPRGRGMLPIPVAAAKETVAIGRTDIEDLDL
YATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKVAKTWKSLSKQELNQMLAETPPVWKGSSKLFR
NLKEKGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKREIKGDEEKR
AMLRLQLYGYHSPTNSVLKTDAEELVSRSYWDTLRRNTSQALFSDLAERADDITSLVTDTTLLVHFFGKK
GKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKG
ITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKFSPHLVNTVFKIFDVDKDDQL
SYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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