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Report for CCDS32978.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32978.1 Public Homo sapiens 19 ZNF430 24 110 108 CCDS HistoryNCBI Gene:80264Re-query CCDS DB by CCDS ID:32978.1Re-query CCDS DB by GeneID:80264See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32978.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261560.10 ENSP00000261560.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261560.10Link to Ensembl Protein Viewer:ENSP00000261560.4Re-query CCDS DB by Nucleotide ID:ENST00000261560Re-query CCDS DB by Protein ID:ENSP00000261560
Original member Current member NCBI NM_025189.4 NP_079465.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025189.4Link to Protein Sequence:NP_079465.3Re-query CCDS DB by Nucleotide ID:NM_025189Re-query CCDS DB by Protein ID:NP_079465Link to BLAST:NP_079465.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079465.3 570 Q9H8G1 570 100% 0 0

Chromosomal Locations for CCDS 32978.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21020801 21020803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21022789 21022881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21033456 21033582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21034086 21034184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21056631 21058021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGGAGAACCTGAAGTCTGGAGTGTATCCTCTCAAGGAAGCAAGTGGATGCCCTGGGGCTGACAGGAATC
TTCTGGTGTACTCTTTTTATGAAAAGGGGCCATTGACATTTAGGGATGTGGCCATAGAATTTTCTCTGGA
GGAGTGGCAATGCCTGGACACTGCTCAGCAGGATTTGTATAGAAAAGTGATGTTAGAGAACTACAGAAAC
CTGGTCTTCTTGGCAGGTATTGCTGTTTCTAAGCCAGACCTGATCACCTGTCTAGAGCAAGGAAAAGAGC
CCTGGAATATGAAGAGACATGCGATGGTAGATCAACCCCCAGTTACATATTCTCATTTTGCCCAAGACCT
TTGGCCAGAGCAGGGCATAAAAGATTCTTTCCAAGAAGTCATATTGAGAAGATATGGAAAATGTGGACAT
GAAGATTTACAGTTAAGAACAGGCTGTAAAAGTGTGGATGAGTGTAATCTGCACAAAGAATGTTATGATG
AACTAAACCAGTGTTTGACAACTACCCAGAGTGAAATATTTCAATATGATAAATATGTGAATGTCTTTTA
TAAATTTTCAAATCCAAATATACAAAAGATAAGACATACTGGAAAGAAGCCTTTCAAATGTAAAAAATGT
GACAAATCGTTTTGCATGCTTTTACACCTAACTCAACATAAAAGAATTCATATTAGGGAAAATTCTTACC
AATGTGAAGAATGTGGTAAAGTCTTTAACTGGTTCTCAACCCTTACTAGACACAGAAGAATTCATACTGG
AGAGAAACCCTACAAATGTGAACAATGTGGCAAAGCTTTTAAGCAGTCCTCAACCCTTACTACACATAAG
ATAATTCATACTGGAGAGAAACCCTACAGATGTGAAGAATGTGGCAAAACCTTTAACCGGTCCTCACACC
TTACTACACATAAAAGAATTCATACTGGAGAGAAACCCTACAGATGTGAAGAATGTGGCAGAGCTTTTAA
CCGGTCCTCACACCTTACTACACATAAGATTATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGT
GGCAAAGCTTTTAACCAATCCTCAACCCTTACTACACATAAGATAATTCATGCTGGAGAGAAACCTTACA
AATGTGAAGAATGTGGCAAAGCTTTTTACCGATTCTCATACCTTACTAAACATAAGATAATTCATACTGG
AGAGAAATTCTACAAATGTGAAGAATGTGGCAAAGGCTTTAATTGGTCCTCGACCCTTACTAAACATAAA
AGAATTCATACTGGAGAGAAACCCTACAAATGTGAACAATGTGGCAAAGCTTTTAATGAGTCCTCAAACC
TTACTGCACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAA
CCGGTCCCCAAAACTTACTGCACATAAGGTAATTCATTCTGGAGAGAAACCCTACAAATGTGAAGAATGT
GGCAAAGCTTTTAACCAATTCTCAAACCTTACTAAACATAAGATAACTCATATTGGAGATACATCTTACA
AATACCTAGAATGTGATAAAGCCTTTAGCCAGTCTTCAACTCTTACTAAACATAAGGTAATTCATACTGG
AGAGAAACCCTACAACTGTGAAGAATACGGCAAAGCTTTCAACCAGTCCTCAAACCTTATTGAACAAAGT
AATTCATACTGGAGAGAAACCCTACAAATGTGA

Translation (570 aa):
MENLKSGVYPLKEASGCPGADRNLLVYSFYEKGPLTFRDVAIEFSLEEWQCLDTAQQDLYRKVMLENYRN
LVFLAGIAVSKPDLITCLEQGKEPWNMKRHAMVDQPPVTYSHFAQDLWPEQGIKDSFQEVILRRYGKCGH
EDLQLRTGCKSVDECNLHKECYDELNQCLTTTQSEIFQYDKYVNVFYKFSNPNIQKIRHTGKKPFKCKKC
DKSFCMLLHLTQHKRIHIRENSYQCEECGKVFNWFSTLTRHRRIHTGEKPYKCEQCGKAFKQSSTLTTHK
IIHTGEKPYRCEECGKTFNRSSHLTTHKRIHTGEKPYRCEECGRAFNRSSHLTTHKIIHTGEKPYKCEEC
GKAFNQSSTLTTHKIIHAGEKPYKCEECGKAFYRFSYLTKHKIIHTGEKFYKCEECGKGFNWSSTLTKHK
RIHTGEKPYKCEQCGKAFNESSNLTAHKIIHTGEKPYKCEECGKAFNRSPKLTAHKVIHSGEKPYKCEEC
GKAFNQFSNLTKHKITHIGDTSYKYLECDKAFSQSSTLTKHKVIHTGEKPYNCEEYGKAFNQSSNLIEQS
NSYWRETLQM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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