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Report for CCDS12298.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12298.1 Public Homo sapiens 19 C19orf53 24 110 108 CCDS HistoryNCBI Gene:28974Re-query CCDS DB by CCDS ID:12298.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12298.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000588234.6 ENSP00000465432.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000588234.6Link to Ensembl Protein Viewer:ENSP00000465432.1Re-query CCDS DB by Nucleotide ID:ENST00000588234Re-query CCDS DB by Protein ID:ENSP00000465432
Original member Current member NCBI NM_014047.3 NP_054766.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014047.3Link to Protein Sequence:NP_054766.1Re-query CCDS DB by Nucleotide ID:NM_014047Re-query CCDS DB by Protein ID:NP_054766Link to BLAST:NP_054766.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054766.1 99 Q9UNZ5 99 100% 0 0

Chromosomal Locations for CCDS 12298.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13774478 13774574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13774652 13774707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13778052 13778198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGGCGCAGGGGCAGCGCAAGTTTCAGGCGCACAAACCCGCAAAGAGTAAGACGGCAGCGGCAGCCTCTG
AAAAGAATCGGGGCCCAAGAAAAGGCGGTCGTGTTATCGCTCCCAAGAAGGCGCGCGTCGTGCAGCAGCA
AAAGCTCAAGAAGAACCTAGAAGTCGGAATCCGGAAGAAGATCGAACATGACGTGGTGATGAAAGCCAGC
AGCAGCCTGCCCAAGAAGCTGGCACTGCTGAAGGCCCCAGCCAAGAAGAAAGGGGCAGCTGCCGCCACCT
CCTCCAAGACACCTTCCTGA

Translation (99 aa):
MAQGQRKFQAHKPAKSKTAAAASEKNRGPRKGGRVIAPKKARVVQQQKLKKNLEVGIRKKIEHDVVMKAS
SSLPKKLALLKAPAKKKGAAAATSSKTPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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