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Report for CCDS4693.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4693.1 Public Homo sapiens 6 C6orf15 24 110 108 CCDS HistoryNCBI Gene:29113Re-query CCDS DB by CCDS ID:4693.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4693.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259870.4 ENSP00000259870.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000259870.4Link to Ensembl Protein Viewer:ENSP00000259870.3Re-query CCDS DB by Nucleotide ID:ENST00000259870Re-query CCDS DB by Protein ID:ENSP00000259870
Original member Current member NCBI NM_014070.3 NP_054789.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014070.3Link to Protein Sequence:NP_054789.2Re-query CCDS DB by Nucleotide ID:NM_014070Re-query CCDS DB by Protein ID:NP_054789Link to BLAST:NP_054789.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054789.2 325 Q6UXA7 325 100% 0 0

Chromosomal Locations for CCDS 4693.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31111381 31112291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31112489 31112555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGCAGGGCCGCGTGGCAGGGAGCTGCGCTCCTCTGGGCCTGCTCCTGGTCTGTCTTCATCTCCCAGGCC
TCTTTGCCCGGAGCATCGGTGTTGTGGAGGAGAAAGTTTCCCAAAACTTGGGGACCAACTTGCCTCAGCT
CGGACAACCTTCCTCCACTGGCCCCTCTAACTCTGAACATCCGCAGCCCGCTCTGGACCCTAGGTCTAAT
GACTTGGCAAGGGTTCCTCTGAAGCTCAGCGTGCCTGCATCAGATGGCTTCCCACCTGCAGGAGGTTCTG
CAGTGCAGAGGTGGCCTCCATCGTGGGGGCTGCCTGCCATGGATTCCTGGCCCCCTGAGGATCCTTGGCA
GATGATGGCTGCTGCGGCTGAGGACCGCCTGGGGGAAGCGCTGCCTGAAGAACTCTCTTACCTCTCCAGT
GCTGCGGCCCTCGCTCCGGGCAGTGGCCCTTTGCCTGGGGAGTCTTCTCCCGATGCCACAGGCCTCTCAC
CCAAGGCTTCACTCCTCCACCAGGACTCGGAGTCCAGACGACTGCCCCGTTCTAATTCACTGGGAGCCGG
GGGAAAAATCCTTTCCCAACGCCCTCCCTGGTCTCTCATCCACAGGGTTCTGCCTGATCACCCCTGGGGT
ACCCTGAATCCCAGTGTGTCCTGGGGAGGTGGAGGCCCTGGGACTGGTTGGGGAACGAGGCCCATGCCAC
ACCCTGAGGGAATCTGGGGTATCAATAATCAACCCCCAGGTACCAGCTGGGGAAATATTAATCGGTATCC
AGGAGGCAGCTGGGGAAATATTAATCGGTATCCAGGAGGCAGCTGGGGGAATATTAATCGGTATCCAGGA
GGCAGCTGGGGGAATATTCATCTATACCCAGGTATCAATAACCCATTTCCTCCTGGAGTCCTCCGCCCTC
CTGGCTCTTCTTGGAACATCCCAGCTGGCTTCCCTAATCCTCCAAGCCCTAGGTTGCAGTGGGGCTAG

Translation (325 aa):
MQGRVAGSCAPLGLLLVCLHLPGLFARSIGVVEEKVSQNLGTNLPQLGQPSSTGPSNSEHPQPALDPRSN
DLARVPLKLSVPASDGFPPAGGSAVQRWPPSWGLPAMDSWPPEDPWQMMAAAAEDRLGEALPEELSYLSS
AAALAPGSGPLPGESSPDATGLSPKASLLHQDSESRRLPRSNSLGAGGKILSQRPPWSLIHRVLPDHPWG
TLNPSVSWGGGGPGTGWGTRPMPHPEGIWGINNQPPGTSWGNINRYPGGSWGNINRYPGGSWGNINRYPG
GSWGNIHLYPGINNPFPPGVLRPPGSSWNIPAGFPNPPSPRLQWG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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