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Report for CCDS33816.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
33816.1 |
Public |
Homo sapiens |
3 |
TAGLN3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:29114](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:33816.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 3 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 33816.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000273368.8 |
ENSP00000273368.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000273368.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000273368.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000273368](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000273368](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000393917.6 |
ENSP00000377494.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000393917.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000377494.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000393917](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000377494](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000455401.6 |
ENSP00000391160.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000455401.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000391160.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000455401](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000391160](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000478951.6 |
ENSP00000419105.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000478951.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000419105.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000478951](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000419105](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001008272.2 |
NP_001008273.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001008272.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001008273.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001008272](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001008273](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001008273.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001008273.2 |
NP_001008274.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001008273.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001008274.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001008273](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001008274](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001008274.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_013259.3 |
NP_037391.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_013259.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_037391.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_013259](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_037391](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_037391.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 33816.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (600 nt): ATGGCTAACAGGGGCCCGAGCTATGGCTTAAGCCGAGAGGTGCAGGAGAAGATCGAGCAGAAGTATGATG CGGACCTGGAGAACAAGCTGGTGGACTGGATCATCCTGCAGTGCGCCGAGGACATAGAGCACCCGCCCCC CGGCAGGGCCCATTTTCAGAAATGGTTAATGGACGGGACGGTCCTGTGCAAGCTGATAAATAGTTTATAC CCACCAGGACAAGAGCCCATACCCAAGATCTCAGAGTCAAAGATGGCTTTTAAGCAGATGGAGCAAATCT CCCAGTTCCTAAAAGCTGCGGAGACCTATGGTGTCAGAACCACCGACATCTTTCAGACGGTGGATCTATG GGAAGGGAAGGACATGGCAGCTGTGCAGAGGACCCTGATGGCTTTAGGCAGCGTTGCAGTCACCAAGGAT GATGGCTGCTATCGGGGAGAGCCATCCTGGTTTCACAGGAAAGCCCAGCAGAATCGGAGAGGCTTTTCCG AGGAGCAGCTTCGCCAGGGACAGAACGTAATAGGCCTGCAGATGGGCAGCAACAAGGGAGCCTCCCAGGC GGGCATGACAGGGTACGGGATGCCCAGGCAGATCATGTAG
Translation (199 aa): MANRGPSYGLSREVQEKIEQKYDADLENKLVDWIILQCAEDIEHPPPGRAHFQKWLMDGTVLCKLINSLY PPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGKDMAAVQRTLMALGSVAVTKD DGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNVIGLQMGSNKGASQAGMTGYGMPRQIM
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