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Report for CCDS55276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55276.1 Public Homo sapiens 8 ZFAT 24 110 108 CCDS HistoryNCBI Gene:57623Re-query CCDS DB by CCDS ID:55276.1Re-query CCDS DB by GeneID:57623See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523399.5 ENSP00000429091.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523399.5Link to Ensembl Protein Viewer:ENSP00000429091.1Re-query CCDS DB by Nucleotide ID:ENST00000523399Re-query CCDS DB by Protein ID:ENSP00000429091
Original member Current member NCBI NM_001174157.2 NP_001167628.1 Accepted alive Link to Nucleotide Sequence:NM_001174157.2Link to Protein Sequence:NP_001167628.1Re-query CCDS DB by Nucleotide ID:NM_001174157Re-query CCDS DB by Protein ID:NP_001167628Link to BLAST:NP_001167628.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001167628.1 1181 Q9P243-4 1181 100% 0 0

Chromosomal Locations for CCDS 55276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 134478482 134478721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134509619 134509749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134512475 134512601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134520883 134521001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134532834 134532972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134565333 134565421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134583832 134584005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134588246 134588395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134590268 134590355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134600436 134600668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134601477 134602933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134608729 134608879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134637461 134637712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134657561 134657737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134712845 134712863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3546 nt):
ATGGAGACGCGGGCGGCAGAAAACACGGCCATCTTTATGTGTAAATGTTGTAACCTCTTCTCACCAAATC
AGTCGGAACTCCTCTCCCACGTTTCAGAGAAGCACATGGAAGAAGGGGTTAATGTTGATGAGATTATTAT
TCCCCTTAGGCCTCTGAGTACACCTGAACCCCCCAACTCAAGCAAAACCGGAGATGAGTTTTTGGTCATG
AAGAGGAAGAGAGGCAGGCCTAAGGGGTCCACGAAGAAGTCCAGCACAGAAGAGGAGCTGGCAGAAAACA
TCGTGAGTCCGACTGAGGACAGCCCGCTGGCTCCGGAGGAAGGGAACAGCCTGCCTCCAAGCAGCTTGGA
GTGTAGCAAGTGCTGTCGGAAGTTCTCCAACACGCGCCAGCTGCGGAAGCACATCTGCATTATCGTGCTG
AATTTGGGTGAGGAGGAAGGAGAAGCAGGTGCTACCAAGATTGTGCCAGTGGAGGCTGGGCCCCCTGAAA
CAGGAGCTACAAATTCTGAGACCACTTCAGCAGACCTGGTGCCTCGGAGAGGCTACCAGGAATACGCCAT
TCAGCAGACACCTTATGAGCAACCAATGAAGTCAAGCAGGCTAGGTCCCACTCAGCTCAAAATCTTCACT
TGTGAATACTGCAACAAGGTCTTCAAGTTCAAGCACTCGCTGCAGGCCCACCTGAGGATCCACACCAATG
AAAAGCCATACAAGTGCCCCCAGTGCAGCTATGCCAGTGCCATCAAGGCCAACCTCAATGTGCACCTGCG
CAAGCACACTGGAGAGAAGTTCGCCTGCGACTATTGCTCGTTCACCTGCCTGAGCAAGGGCCACCTCAAG
GTGCACATCGAGCGAGTGCACAAGAAGATCAAGCAGCACTGCCGCTTCTGCAAGAAGAAGTACTCTGACG
TCAAGAACCTCATCAAGCACATCCGAGACGCGCATGACCCACAGGACAAGAAGGTCAAAGAGGCCTTGGA
CGAGCTCTGCCTGATGACGAGGGAGGGCAAGCGGCAGCTGCTCTATGACTGCCACATCTGTGAGCGCAAG
TTCAAGAACGAGCTGGACCGTGACCGCCATATGCTGGTCCACGGAGACAAGTGGCCTTTTGCCTGTGAGC
TCTGTGGCCATGGGGCCACCAAGTACCAGGCGCTGGAACTGCATGTCAGGAAGCACCCCTTCGTGTACGT
CTGTGCCGTCTGCCGCAAGAAGTTCGTCAGCTCCATCAGGCTGCGCACCCACATCAAAGAGGTGCACGGG
GCTGCCCAGGAGGCCTTGGTCTTCACCAGTTCCATCAACCAGAGCTTCTGCCTCCTGGAACCTGGTGGGG
ACATCCAGCAAGAAGCTCTGGGGGACCAGCTACAGCTGGTGGAAGAGGAGTTTGCCCTCCAGGGCGTGAA
TGCACTCAAGGAAGAGGCCTGTCCTGGGGACACTCAGCTGGAGGAGGGCCGGAAGGAGCCGGAGGCCCCT
GGGGAAATGCCTGCCCCAGCTGTGCACCTGGCCTCCCCGCAGGCCGAAAGCACAGCCCTGCCACCCTGTG
AGCTGGAAACCACCGTGGTCTCCTCCTCAGACCTGCATTCTCAAGAGGTGGTTTCAGATGATTTTTTGTT
GAAAAATGATACCTCCTCCGCAGAGGCTCATGCTGCTCCTGAGAAGCCCCCAGACATGCAGCACAGAAGC
TCAGTCCAGACGCAAGGTGAAGTGATCACACTACTGCTGTCCAAGGCCCAGAGTGCTGGGTCAGATCAGG
AAAGCCATGGCGCCCAGAGCCCCCTAGGGGAAGGGCAGAACATGGCTGTGCTTTCAGCTGGTGACCCAGA
TCCCAGCAGGTGTCTCAGGTCAAACCCAGCTGAGGCCTCAGACCTCCTCCCTCCAGTAGCTGGTGGTGGG
GACACCATCACACATCAGCCTGACTCTTGCAAAGCTGCCCCTGAGCACCGGTCAGGCATCACCGCTTTCA
TGAAGGTCCTGAACAGTTTACAGAAGAAGCAAATGAACACCAGCTTGTGTGAGCGGATCCGGAAGGTTTA
TGGAGACCTGGAGTGTGAATACTGTGGCAAACTTTTTTGGTACCAAGTGCATTTTGATATGCATGTCCGC
ACCCACACCCGGGAACATCTGTATTATTGCTCTCAGTGTCATTATTCTTCCATCACCAAAAACTGCCTTA
AACGCCACGTAATTCAGAAACACAGTAACATCTTGCTGAAGTGTCCCACCGATGGCTGTGACTACTCAAC
TCCAGATAAATATAAGCTACAGGCACATCTTAAAGTTCACACAGCACTGGACAAAAGGAGTTATTCTTGT
CCTGTTTGTGAAAAGTCTTTTTCAGAGGATCGATTGATAAAGTCACATATCAAGACCAACCATCCTGAGG
TCTCCATGAGCACCATTTCTGAGGTTCTCGGGAGGAGGGTTCAGCTGAAAGGGCTAATTGGAAAGAGAGC
CATGAAATGCCCATATTGTGACTTTTATTTCATGAAGAATGGCTCAGACCTTCAGCGTCATATTTGGGCT
CATGAAGGTGTGAAGCCCTTCAAGTGTTCTTTGTGTGAGTATGCAACTCGTAGCAAGAGTAACCTCAAGG
CTCATATGAATCGTCACAGCACTGAGAAAACCCACCTATGTGACATGTGTGGCAAGAAATTCAAATCAAA
AGGGACACTGAAAAGTCACAAACTCCTTCACACTGCAGATGGGAAGCAGTTTAAGTGCACGGTGTGTGAC
TACACAGCGGCCCAGAAGCCACAGCTGCTGCGGCACATGGAACAGCATGTCTCCTTCAAGCCTTTCCGCT
GTGCCCATTGCCATTACTCCTGCAACATATCTGGCTCTCTGAAGCGGCACTACAACAGGAAGCACCCTAA
TGAGGAGTATGCCAACGTGGGCACCGGGGAGCTGGCAGCGGAGGTGCTCATCCAGCAAGGTGGTTTGAAG
TGTCCTGTTTGCAGCTTTGTATATGGCACCAAATGGGAGTTCAATAGGCACTTGAAGAACAAACATGGCT
TGAAGGTGGTGGAAATTGATGGAGACCCCAAGTGGGAGACAGCAACAGAAGCTCCTGAGGAGCCCTCCAC
CCAGTATCTCCACATCACAGAGGCCGAAGAAGACGTTCAAGGGACACAGGCAGCGGTGGCCGCGCTCCAG
GACCTGAGATACACCTCTGAGAGTGGCGACCGACTGGACCCCACGGCCGTGAACATCCTGCAGCAGATCA
TTGAGCTGGGCGCCGAGACCCATGACGCCACTGCCCTTGCCTCGGTGGTTGCCATGGCACCAGGGACGGT
GACTGTGGTTAAGCAGGTCACCGAGGAGGAGCCCAGCTCCAACCACACGGTCATGATCCAGGAGACGGTC
CAGCAAGCGTCCGTGGAGCTTGCCGAGCAGCACCACCTGGTGGTGTCCTCCGACGACGTGGAGGGCATTG
AGACGGTGACTGTCTACACGCAGGGCGGGGAGGCCTCGGAGTTCATCGTCTACGTGCAGGAGGCCATGCA
GCCTGTGGAGGAGCAGGCTGTGGAGCAGCCGGCCCAGGAACTCTAG

Translation (1181 aa):
METRAAENTAIFMCKCCNLFSPNQSELLSHVSEKHMEEGVNVDEIIIPLRPLSTPEPPNSSKTGDEFLVM
KRKRGRPKGSTKKSSTEEELAENIVSPTEDSPLAPEEGNSLPPSSLECSKCCRKFSNTRQLRKHICIIVL
NLGEEEGEAGATKIVPVEAGPPETGATNSETTSADLVPRRGYQEYAIQQTPYEQPMKSSRLGPTQLKIFT
CEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLK
VHIERVHKKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTREGKRQLLYDCHICERK
FKNELDRDRHMLVHGDKWPFACELCGHGATKYQALELHVRKHPFVYVCAVCRKKFVSSIRLRTHIKEVHG
AAQEALVFTSSINQSFCLLEPGGDIQQEALGDQLQLVEEEFALQGVNALKEEACPGDTQLEEGRKEPEAP
GEMPAPAVHLASPQAESTALPPCELETTVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRS
SVQTQGEVITLLLSKAQSAGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRCLRSNPAEASDLLPPVAGGG
DTITHQPDSCKAAPEHRSGITAFMKVLNSLQKKQMNTSLCERIRKVYGDLECEYCGKLFWYQVHFDMHVR
THTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILLKCPTDGCDYSTPDKYKLQAHLKVHTALDKRSYSC
PVCEKSFSEDRLIKSHIKTNHPEVSMSTISEVLGRRVQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWA
HEGVKPFKCSLCEYATRSKSNLKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTADGKQFKCTVCD
YTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKHPNEEYANVGTGELAAEVLIQQGGLK
CPVCSFVYGTKWEFNRHLKNKHGLKVVEIDGDPKWETATEAPEEPSTQYLHITEAEEDVQGTQAAVAALQ
DLRYTSESGDRLDPTAVNILQQIIELGAETHDATALASVVAMAPGTVTVVKQVTEEEPSSNHTVMIQETV
QQASVELAEQHHLVVSSDDVEGIETVTVYTQGGEASEFIVYVQEAMQPVEEQAVEQPAQEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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