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Report for CCDS55530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55530.1 Public Homo sapiens X ZNF185 24 110 108 CCDS HistoryNCBI Gene:7739Re-query CCDS DB by CCDS ID:55530.1Re-query CCDS DB by GeneID:7739See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55530.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539731.6 ENSP00000444367.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539731.6Link to Ensembl Protein Viewer:ENSP00000444367.1Re-query CCDS DB by Nucleotide ID:ENST00000539731Re-query CCDS DB by Protein ID:ENSP00000444367
Original member Current member NCBI NM_001178107.1 NP_001171578.1 Accepted alive Link to Nucleotide Sequence:NM_001178107.1Link to Protein Sequence:NP_001171578.1Re-query CCDS DB by Nucleotide ID:NM_001178107Re-query CCDS DB by Protein ID:NP_001171578Link to BLAST:NP_001171578.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171578.1 692 O15231-8 692 100% 0 0

Chromosomal Locations for CCDS 55530.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152914490 152914523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152914710 152914833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152915138 152915203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152917131 152917169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152917285 152917362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152918065 152918154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152918983 152919081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152920328 152920411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152920710 152920748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152922173 152922256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152922720 152922809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152931672 152931776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152932873 152932971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152936418 152936513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152938074 152938163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152945267 152945464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152959699 152959896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152963839 152963949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152965447 152965527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152967167 152967238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152969382 152969484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152970443 152970541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2079 nt):
ATGAGTATCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGCAATA
ACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGA
ATCGGAGGGTCGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAGCTGGGGAG
GTTCCGAAGCCTAGGCCTCCGAGCACAAGGGCTCCCACTGGCTACATCATCCGGGGAGTGTTCACCAAGC
CCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAG
TCTGGTGAGAACAGCTAACGCTGGTCCTCCCCGCCCCTCCTCCTCTGGCTACAAGATGACCACTGAGGAT
TACAAGAAGCTGGCACCCTACAATATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAGGAGGAGGAGG
AGGAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGTGTTCTGAGGAG
GACAGCTCCCCGGGAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTCCTACCCAGGAGACA
CAGGCACCGTTTATCGCGAAGAGGGTGGAGGTGGTGGAAGAGGACGGGCCTTCTGAGAAGAGCCAGGACC
CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTCGGGC
AATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCCGCTGGGAGCCAGGAGCTCAGGTCTTCCCCAGGC
AACAAAGACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGGTGAGGAGGCTTTCAGGG
CCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTGATGGCAATGTGGGATCCGGAGCCACGGG
CTCCCGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCCGAGAGAGGAAGGCTGTGTGCAGCTGCTAGC
TTTGCCTCTTTCCTGGAAGACCAGGATGGGCACAGTGCCAACTCTCAGTCCTGCAAGCCTAGACCAGCAG
CCATCAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCA
GGAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTGATTATGAGGGGAAGGATGTGGCCACCAGGGTC
GGAGAGGCCTGGCAGGAGAGGCCTGGAGCTCCAAGAGGTGGCCAAGGAGACCCAGCTGTACCCGCTCAGC
AACCTGCAGATCCCAGCACCCCAGAGCGGCAGAGCAGCCCCAGCGGATCTGAGCAACTTGTCAGACGAGA
GAGTTGTGGCAGCAGCGTGTTGACTGATTTTGAGGGGAAGGATGTGGCCACCAAGGTCGGAGAGGCCTGG
CAGGACAGGCCTGGAGCCCCAAGAGGTGGCCAAGGAGACCCAGCTGTACCCACTCAGCAACCTGCAGATC
CCAGTACCCCAGAACAGCAGAACAGCCCCAGCGGATCTGAGCAATTCGTCAGACGAGAGAGCTGCACCAG
CAGGGTGAGGAGCCCCTCGAGCTGCATGGTCACTGTTACTGTCACTGCCACATCTGAGCAGCCTCACATT
TATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGT
ACGTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGA
GGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGGAGGG
ATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCAAAGATTACCCTAGAACATCTTGGTATCTGCT
GCCATGAATATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCAT
TCACCGTGACACCATTCACTGTGGGAAATGCTATGAGAAGCTCTTCTAG

Translation (692 aa):
MSISALGGRTKGKPLPPGEEERNNVLKQMKVRTTLKGDKSWITKQDESEGRTIELPSGRSRATSFSSAGE
VPKPRPPSTRAPTGYIIRGVFTKPIDSSSQPQQQFPKANGTPKSAASLVRTANAGPPRPSSSGYKMTTED
YKKLAPYNIRRSSTSGDTEEEEEEEVVPFSSDEQKRRSEAASGVLRRTAPREHSYVLSAAKKSTGPTQET
QAPFIAKRVEVVEEDGPSEKSQDPPALARSTPGSNSADGGRTKASRAIWIECLPSMPSPAGSQELRSSPG
NKDKEAPCSRELQRDLAGEEAFRAPNTDAARSSAQLSDGNVGSGATGSRPEGLAAVDIGSERGRLCAAAS
FASFLEDQDGHSANSQSCKPRPAAISSSATSVSAVPADRKSNSTAAQEDAKADPKGALADYEGKDVATRV
GEAWQERPGAPRGGQGDPAVPAQQPADPSTPERQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKVGEAW
QDRPGAPRGGQGDPAVPTQQPADPSTPEQQNSPSGSEQFVRRESCTSRVRSPSSCMVTVTVTATSEQPHI
YIPAPASELDSSSTTKGILFVKEYVNASEVSSGKPVSARYSNVSSIEDSFAMEKKPPCGSTPYSERTTGG
ICTYCNREIRDCPKITLEHLGICCHEYCFKCGICSKPMGDLLDQIFIHRDTIHCGKCYEKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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