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Report for CCDS26876.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26876.1 Public Mus musculus 14 Tmem254 23 108 98 CCDS HistoryNCBI Gene:66039Re-query CCDS DB by CCDS ID:26876.1Re-query CCDS DB by GeneID:66039See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26876.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100811.5 ENSMUSP00000098374.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100811.5Link to Ensembl Protein Viewer:ENSMUSP00000098374.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100811Re-query CCDS DB by Protein ID:ENSMUSP00000098374
Original member Current member NCBI NM_025311.3 NP_079587.1 Accepted alive Link to Nucleotide Sequence:NM_025311.3Link to Protein Sequence:NP_079587.1Re-query CCDS DB by Nucleotide ID:NM_025311Re-query CCDS DB by Protein ID:NP_079587Link to BLAST:NP_079587.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079587.1 129 P0DN89-2 129 100% 0 0

Chromosomal Locations for CCDS 26876.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 25924787 25924907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25925522 25925581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25925798 25925901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25927045 25927149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGGTGGTGGCGAAGTCGGAGGCCCGTAGGGACCCCACTGCATACTTCCGTGTAGCCAGACTCTGGCCCT
CACTGATCACCGCCCTAGGGCTGGGCTACTTCGCGTGGGCTGTCTTCTGGCCTCAGAGCATCCCTTATCA
GAGCCTTGGGCCCCTGGGTCCCTTCACGAAGTATTTGGTGGACCACTATCACACCTTCCTAAGGAATGGG
TATTGGCTTGCTTGGCTAATTCATGTGGGAGAGTCCTTGTATGCCTTGGTTTTATGCAAGCGTAAAGGAA
TCACAGACGTCCAGGCCCAGCTCCTCTGGTTCCTACAGACTTTTCTGTTTGGTGTAGCCTCTCTCTCCAT
CCTGATTGCTTACAGATCAAAGCGCCAAAAACACAATTAA

Translation (129 aa):
MVVAKSEARRDPTAYFRVARLWPSLITALGLGYFAWAVFWPQSIPYQSLGPLGPFTKYLVDHYHTFLRNG
YWLAWLIHVGESLYALVLCKRKGITDVQAQLLWFLQTFLFGVASLSILIAYRSKRQKHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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