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Report for CCDS3155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3155.1 Public Homo sapiens 3 GPR171 24 110 108 CCDS HistoryNCBI Gene:29909Re-query CCDS DB by CCDS ID:3155.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309180.6 ENSP00000308479.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309180.6Link to Ensembl Protein Viewer:ENSP00000308479.5Re-query CCDS DB by Nucleotide ID:ENST00000309180Re-query CCDS DB by Protein ID:ENSP00000308479
Original member Current member EBI ENST00000617554.1 ENSP00000482588.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617554.1Link to Ensembl Protein Viewer:ENSP00000482588.1Re-query CCDS DB by Nucleotide ID:ENST00000617554Re-query CCDS DB by Protein ID:ENSP00000482588
Original member Current member NCBI NM_013308.4 NP_037440.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013308.4Link to Protein Sequence:NP_037440.3Re-query CCDS DB by Nucleotide ID:NM_013308Re-query CCDS DB by Protein ID:NP_037440Link to BLAST:NP_037440.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037440.3 319 O14626 319 100% 0 0

Chromosomal Locations for CCDS 3155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 151198427 151199386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGACAAACAGTTCGTTCTTCTGCCCAGTTTATAAAGATCTGGAGCCATTCACGTATTTTTTTTATTTAG
TTTTCCTTGTTGGAATTATTGGAAGTTGTTTTGCAACCTGGGCTTTTATACAGAAGAATACGAATCACAG
GTGTGTGAGCATCTACTTAATTAATTTGCTTACAGCCGATTTCCTGCTTACTCTGGCATTACCAGTGAAA
ATTGTTGTTGACTTGGGTGTGGCACCTTGGAAGCTGAAGATATTCCACTGCCAAGTAACAGCCTGCCTCA
TCTATATCAATATGTATTTATCAATTATCTTCTTAGCATTTGTCAGCATTGACCGCTGTCTTCAGCTGAC
ACACAGCTGCAAGATCTACCGAATACAAGAACCCGGATTTGCCAAAATGATATCAACCGTTGTGTGGCTA
ATGGTCCTTCTTATAATGGTGCCAAATATGATGATTCCCATCAAAGACATCAAGGAAAAGTCAAATGTGG
GTTGTATGGAGTTTAAAAAGGAATTTGGAAGAAATTGGCATTTGCTGACAAATTTCATATGTGTAGCAAT
ATTTTTAAATTTCTCAGCCATCATTTTAATATCCAATTGCCTTGTAATTCGACAGCTCTACAGAAACAAA
GATAATGAAAATTACCCAAATGTGAAAAAGGCTCTCATCAACATACTTTTAGTGACCACGGGCTACATCA
TATGCTTTGTTCCTTACCACATTGTCCGAATCCCGTATACCCTCAGCCAGACAGAAGTCATAACTGATTG
CTCAACCAGGATTTCACTCTTCAAAGCCAAAGAGGCTACACTGCTCCTGGCTGTGTCGAACCTGTGCTTT
GATCCTATCCTGTACTATCACCTCTCAAAAGCATTCCGCTCAAAGGTCACTGAGACTTTTGCCTCACCTA
AAGAGACCAAGGCTCAGAAAGAAAAATTAAGATGTGAAAATAATGCATAA

Translation (319 aa):
MTNSSFFCPVYKDLEPFTYFFYLVFLVGIIGSCFATWAFIQKNTNHRCVSIYLINLLTADFLLTLALPVK
IVVDLGVAPWKLKIFHCQVTACLIYINMYLSIIFLAFVSIDRCLQLTHSCKIYRIQEPGFAKMISTVVWL
MVLLIMVPNMMIPIKDIKEKSNVGCMEFKKEFGRNWHLLTNFICVAIFLNFSAIILISNCLVIRQLYRNK
DNENYPNVKKALINILLVTTGYIICFVPYHIVRIPYTLSQTEVITDCSTRISLFKAKEATLLLAVSNLCF
DPILYYHLSKAFRSKVTETFASPKETKAQKEKLRCENNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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