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Report for CCDS56029.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56029.1 Public Homo sapiens 17 KRTAP9-1 24 110 108 CCDS HistoryNCBI Gene:728318Re-query CCDS DB by CCDS ID:56029.1Re-query CCDS DB by GeneID:728318See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56029.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398470.1 ENSP00000381488.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398470.1Link to Ensembl Protein Viewer:ENSP00000381488.1Re-query CCDS DB by Nucleotide ID:ENST00000398470Re-query CCDS DB by Protein ID:ENSP00000381488
Original member Current member NCBI NM_001190460.1 NP_001177389.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001190460.1Link to Protein Sequence:NP_001177389.1Re-query CCDS DB by Nucleotide ID:NM_001190460Re-query CCDS DB by Protein ID:NP_001177389Link to BLAST:NP_001177389.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177389.1 250 A8MXZ3 250 100% 0 0

Chromosomal Locations for CCDS 56029.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41189887 41190639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (753 nt):
ATGACCCACTGCTGTTCCCCTTGCTGTCAGCCTACATGCTGCAGGACCACCTGCTGCAGGACAACCTGCT
GGAAGCCCACCACTGTGACCACCTGCAGCAGCACACCCTGTTGCCAGCCCTCCTGCTGTGTGCCCAGCTG
CTGCCAGCCTTGCTGCCACCCAACTTGCTGTCAAAACACCTGCTGCAGGACCACCTGCTGCCAGCCCACT
TGTGTGGCCAGCTGCTGCCAGCCTTCCTGCTGCAGCACACCCTGCTGCCAGCCCACCTGCTGTGGGTCCA
GCTGCTGTGGCCAAACCAGCTGTGGGTCCAGCTGCTGTCAGCCTATTTGTGGGTCCAGTTGCTGTCAGCC
TTGCTGTCACCCGACTTGCTATCAAACTATCTGCTTCAGGACCACCTGCTGCCAGCCTACCTGCTGCCAG
CCCACCTGCTGCAGGAACACCTCTTGCCAGCCCACCTGCTGTGGGTCCAGCTGCTGCCAGCCTTGCTGCC
ACCCAACATGCTGTCAAACCATTTGTAGATCCACCTGCTGCCAACCATCCTGTGTGACCAGATGCTGCAG
CACACCCTGTTGCCAGCCAACCTGTGGTGGGTCCAGCTGCTGTAGCCAAACCTGCAATGAGTCCAGCTAT
TGTCTGCCTTGCTGCCGTCCCACCTGCTGCCAGACCACCTGCTACAGGACCACCTGTTGCCGCCCCAGCT
GTTGCTGCAGTCCTTGCTGTGTCTCCAGCTGCTGCCAGCCTTCCTGCTGCTAA

Translation (250 aa):
MTHCCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPCCHPTCCQNTCCRTTCCQPT
CVASCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTCCQ
PTCCRNTSCQPTCCGSSCCQPCCHPTCCQTICRSTCCQPSCVTRCCSTPCCQPTCGGSSCCSQTCNESSY
CLPCCRPTCCQTTCYRTTCCRPSCCCSPCCVSSCCQPSCC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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