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Report for CCDS56193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56193.1 Public Homo sapiens 20 DBNDD2 24 110 108 CCDS HistoryNCBI Gene:55861Re-query CCDS DB by CCDS ID:56193.1Re-query CCDS DB by GeneID:55861See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372720.7 ENSP00000361805.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372720.7Link to Ensembl Protein Viewer:ENSP00000361805.3Re-query CCDS DB by Nucleotide ID:ENST00000372720Re-query CCDS DB by Protein ID:ENSP00000361805
Original member Current member NCBI NM_018478.3 NP_060948.3 Accepted alive Link to Nucleotide Sequence:NM_018478.3Link to Protein Sequence:NP_060948.3Re-query CCDS DB by Nucleotide ID:NM_018478Re-query CCDS DB by Protein ID:NP_060948Link to BLAST:NP_060948.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060948.3 259 Q9BQY9-1 259 100% 0 0

Chromosomal Locations for CCDS 56193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 45406452 45406610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45408333 45408606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45408801 45408938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 45409932 45410140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGGGTGCGGGTAACTTTTTGACCGCCTTGGAAGTACCAGTAGCCGCGCTCGCAGGGGCTGCCTCCGACC
GCCGGGCGAGCTGCGAGCGAGTGAGCCCGCCACCGCCCCTCCCCCACTTCCGCCTCCCGCCTCTTCCTCG
TTCCCGGCTCCCAGGGCCCGTGTCCAGGCCGGAGCCAGGGGCCCCACTGTTGGGATGCTGGCTGCAGTGG
GGCGCCCCAAGCCCAGGTCCCCTCTGTCTTCTCTTTCGACTTTGCAGCTGTACTTGTTTTGCTCCTCTAC
CCGCAGGAGCTGACATGGACCCAAATCCTCGGGCCGCCCTGGAGCGCCAGCAGCTCCGCCTTCGGGAGCG
GCAAAAATTCTTCGAGGACATTTTACAGCCAGAGACAGAGTTTGTCTTTCCTCTGTCCCATCTGCATCTC
GAGTCGCAGAGACCCCCCATAGGTAGTATCTCATCCATGGAAGTGAATGTGGACACACTGGAGCAAGTAG
AACTTATTGACCTTGGGGACCCGGATGCAGCAGATGTGTTCTTGCCTTGCGAAGATCCTCCACCAACCCC
CCAGTCGTCTGGGATGGACAACCATTTGGAGGAGCTGAGCCTGCCGGTGCCTACATCAGACAGGACCACA
TCTAGGACCTCCTCCTCCTCCTCCTCCGACTCCTCCACCAACCTGCATAGCCCAAATCCAAGTGATGATG
GAGCAGATACGCCCTTGGCACAGTCGGATGAAGAGGAGGAAAGGGGTGATGGAGGGGCAGAGCCTGGAGC
CTGCAGCTAG

Translation (259 aa):
MGAGNFLTALEVPVAALAGAASDRRASCERVSPPPPLPHFRLPPLPRSRLPGPVSRPEPGAPLLGCWLQW
GAPSPGPLCLLFRLCSCTCFAPLPAGADMDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHL
ESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTT
SRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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