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Report for CCDS18291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18291.1 Public Mus musculus 4 Lurap1l 23 108 98 CCDS HistoryNCBI Gene:52829Re-query CCDS DB by CCDS ID:18291.1Re-query CCDS DB by GeneID:52829See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 18291.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055922.3 ENSMUSP00000062628.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055922.3Link to Ensembl Protein Viewer:ENSMUSP00000062628.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000055922Re-query CCDS DB by Protein ID:ENSMUSP00000062628
Original member Current member NCBI NM_026821.5 NP_081097.2 Accepted alive Link to Nucleotide Sequence:NM_026821.5Link to Protein Sequence:NP_081097.2Re-query CCDS DB by Nucleotide ID:NM_026821Re-query CCDS DB by Protein ID:NP_081097Link to BLAST:NP_081097.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081097.2 221 Q8K2P1 221 100% 0 0

Chromosomal Locations for CCDS 18291.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 80911355 80911645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 80953563 80953937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGGAAGACAGCCCGCTGCCAGACCTCAGAGACATCGAGCTGAAGCTGGGGCGCAAAGTGCCCGAGAGCC
TAGCGCGCTCGCTGCGCGGGGAGGAGCTGGCGCCTCGGGAAGGGGCTGCGGACCCCAGCGGGGTTGGTGG
GAGCTGCAGCAGCAGCAGTAGCTGCAGCAGCTTTGCGCCCTCCGTGTCCTCCTCGTCGTCATCCTCCCCT
GCCTCTGGCTCTCCACGACGTAGCCACCCCAGCGCCCTGGAGAGGTTAGAGACCAAACTGCACATCCTCA
GACAGGAGATGGTTAACCTCAGAGCCACTGATGTAAGGCTCATGCGTCAATTGCTCCTCATCAATGAGAG
CATCGAGTCCATCAAGTGGATGATCGAGGAAAAAGCCACCATTACCAGCCGAGGCAGCAGTCTCAGTGGC
AGCCTGTGTAGTTTGCTGGAGAGTCAGAGTACCTCCTTACGTGGCAGCTACAACAGCCTCCATGATGGCA
GTGATGGGCTGGATGGCATCTCAGTAGGGAGCTACCTGGACACTTTGGCAGATGATGTACCAGGTCATCA
GACCCCTTCAGACTTGGATCAGTTCAGTGACAGCTCCATCATAGAGGACTCACAGGCTCTGCACAAGCAT
CCCAAGTTGGATTCTGAGTACTACTGCTTTGGCTAA

Translation (221 aa):
MEDSPLPDLRDIELKLGRKVPESLARSLRGEELAPREGAADPSGVGGSCSSSSSCSSFAPSVSSSSSSSP
ASGSPRRSHPSALERLETKLHILRQEMVNLRATDVRLMRQLLLINESIESIKWMIEEKATITSRGSSLSG
SLCSLLESQSTSLRGSYNSLHDGSDGLDGISVGSYLDTLADDVPGHQTPSDLDQFSDSSIIEDSQALHKH
PKLDSEYYCFG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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