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Report for CCDS12862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12862.1 Public Homo sapiens 19 VN1R2 24 110 108 CCDS HistoryNCBI Gene:317701Re-query CCDS DB by CCDS ID:12862.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341702.3 ENSP00000351244.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341702.3Link to Ensembl Protein Viewer:ENSP00000351244.2Re-query CCDS DB by Nucleotide ID:ENST00000341702Re-query CCDS DB by Protein ID:ENSP00000351244
Original member Current member NCBI NM_173856.2 NP_776255.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173856.2Link to Protein Sequence:NP_776255.2Re-query CCDS DB by Nucleotide ID:NM_173856Re-query CCDS DB by Protein ID:NP_776255Link to BLAST:NP_776255.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776255.2 395 Q8NFZ6 395 100% 0 0

Chromosomal Locations for CCDS 12862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53258376 53259563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGACTCACACTCTTTACCCTACCCCTTTTGCTTTGTATCCAATAAATATCAGCGCAGCCTGGCATTTGG
GGCCACTACCAGTCTCCTGCTTTGTATCCAATAAATATCAGTGCAGCCTGGCATTCGGGGCCACTACCGG
TCTCCGCGTCTTGGTGGTAGTGGTCCCCCAGACACAGCTGTCTTTTCTTTCATCTCTTTGTCTTGTGTCT
TTATTTCTACACTCTCTTGTCTCTGCACACGGAGAGAAACCCACCAAACCTGTGGGGCTGGACCCTACAC
TATTCCAGGTAGTTGTTGGAATCCTGGGGAATTTTTCACTCTTATATTATTATATGTTCCTTTACTTTAG
GGGATACAAGCCAAGATCCACAGATTTGATTCTCAGGCACCTGACTGTAGCTGACTCCTTGGTTATCCTA
TCTAAAAGAATCCCAGAGACCATGGCAACTTTTGGGTTGAAACATTTTGACAATTATTTTGGATGCAAAT
TTCTTTTGTATGCACACAGGGTAGGCAGGGGTGTGTCCATTGGAAGCACCTGCCTCTTGAGTGTCTTCCA
GGTGATCACCATCAACCCTAGGAACTCCAGGTGGGCAGAGATGAAAGTAAAAGCCCCGACATACATTGGT
CTCTCCAATATCCTGTGCTGGGCCTTCCACATGCTGGTAAATGCCATTTTTCCTATTTATACAACTGGCA
AATGGAGCAACAACAACATCACAAAGAAAGGAGATTTGGGATATTGTTCTGCCCCACTTAGTGATGAAGT
CACAAAGTCAGTATATGCAGCATTGACATCCTTCCATGATGTTTTGTGTCTGGGGCTCATGCTCTGGGCC
AGCAGCTCCATCGTTTTGGTCTTGTACAGGCACAAACAGCAGGTACAACACATCTGTAGGAACAATCTCT
ACCCCAACTCTTCTCCTGGGAACAGAGCCATCCAAAGCATCCTTGCATTGGTGAGCACCTTTGCATTATG
TTACGCCCTTTCCTTCATCACCTACGTTTATTTAGCTCTCTTCGATAATTCCAGTTGGTGGCTAGTGAAC
ACTGCTGCACTAATCATTGCCTGTTTTCCAACTATTAGCCCTTTTGTTCTCATGTGCCGTGACCCCAGCA
GATCCAGGCTCTGCAGTATCTGCTGCAGAAGAAATAGACGATTCTTTCATGATTTCAGGAAAATGTGA

Translation (395 aa):
MTHTLYPTPFALYPINISAAWHLGPLPVSCFVSNKYQCSLAFGATTGLRVLVVVVPQTQLSFLSSLCLVS
LFLHSLVSAHGEKPTKPVGLDPTLFQVVVGILGNFSLLYYYMFLYFRGYKPRSTDLILRHLTVADSLVIL
SKRIPETMATFGLKHFDNYFGCKFLLYAHRVGRGVSIGSTCLLSVFQVITINPRNSRWAEMKVKAPTYIG
LSNILCWAFHMLVNAIFPIYTTGKWSNNNITKKGDLGYCSAPLSDEVTKSVYAALTSFHDVLCLGLMLWA
SSSIVLVLYRHKQQVQHICRNNLYPNSSPGNRAIQSILALVSTFALCYALSFITYVYLALFDNSSWWLVN
TAALIIACFPTISPFVLMCRDPSRSRLCSICCRRNRRFFHDFRKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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