NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36793.1 Public Mus musculus 14 D830030K20Rik 23 108 98 CCDS HistoryNCBI Gene:320333Re-query CCDS DB by CCDS ID:36793.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36793.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178670.1 ENSMUSP00000137168.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178670.1Link to Ensembl Protein Viewer:ENSMUSP00000137168.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178670Re-query CCDS DB by Protein ID:ENSMUSP00000137168
Original member Current member EBI ENSMUST00000225885.1 ENSMUSP00000153088.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000225885.1Link to Ensembl Protein Viewer:ENSMUSP00000153088.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000225885Re-query CCDS DB by Protein ID:ENSMUSP00000153088
Original member Current member NCBI NM_001320366.1 NP_001307295.1 Accepted alive Link to Nucleotide Sequence:NM_001320366.1Link to Protein Sequence:NP_001307295.1Re-query CCDS DB by Nucleotide ID:NM_001320366Re-query CCDS DB by Protein ID:NP_001307295Link to BLAST:NP_001307295.1
Original member Current member NCBI NM_177135.5 NP_796109.1 Accepted alive Link to Nucleotide Sequence:NM_177135.5Link to Protein Sequence:NP_796109.1Re-query CCDS DB by Nucleotide ID:NM_177135Re-query CCDS DB by Protein ID:NP_796109Link to BLAST:NP_796109.1

Chromosomal Locations for CCDS 36793.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 3225315 3225391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 3226318 3226449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 3227119 3227302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 3233470 3233517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGAGGAAGATCAGCAATGACATGGAGGAAATGGGTGGAATCCTGGAACTTTACATATATGAGGATTTGA
ACTACAGGATGAACACTGAATTCAACATCATTAAATCACAACATGAGAAGACAATGTTGGATATGAATGA
AATGATCCAGTCCATAATTGTTTCCATGCAGTACTCCAAGGAACTGATAGAAGATAACTATTCCTACAGC
ATTAAGGAGGACCACCTCCTCCGTGAGTGCACTCAACTCAGCGAAAAAGTAAGGATATTACTGAATGAGA
ACAGAAAGCTGCTAGTGGAGCAGGCTGGAACGCAATTGTCTCATGGGGAAGAAAAGAGGTTCTGTGAGGA
GGCCAGCAAGAACATCTGTGCCTCAAGTGCCAAGGAGCAGCAGTGTGTAAACTCCAGTAGAAACCGGAAC
ATGGCACAGACCACGACATGA

Translation (146 aa):
MRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIVSMQYSKELIEDNYSYS
IKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHGEEKRFCEEASKNICASSAKEQQCVNSSRNRN
MAQTTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH